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The map label for this gene is yvyD [H]

Identifier: 18311154

GI number: 18311154

Start: 2492302

End: 2492841

Strand: Reverse

Name: yvyD [H]

Synonym: CPE2172

Alternate gene names: 18311154

Gene position: 2492841-2492302 (Counterclockwise)

Preceding gene: 18311155

Following gene: 18311153

Centisome position: 82.23

GC content: 28.52

Gene sequence:

>540_bases
ATGAAAGTAACAGTACATGCTAAAAATATAGAGTTAACAAATGCTTTAAAGGATTGTGTAGAAAAGAAAATATCCAAATT
AAGCAAGTATTTTGAACCAGGAGTTGAAGCAAAAGCCACTTTAAGCGTAGAGAAAAATAAACAAATCGTAGAAATTATGA
TTCCTTTTAATGGAATATTATTAAGAGGTGAAGAATCTACAGACGATATGTATAAGTCAATAGATTTAGTTGAAGAAAAA
ATCGAAAGACAAATAAGAAAACAAAAAACTAGATTATCAAAGAAAAATAGATATGATTCATTAAGATTTGCTCATATAGA
TCCAATAGAGGATATGAAAGAAGAAAAAGAAGCAAAAATAGTAAAAACTAAAAGATTTGATGTTAAGCCAATGGGAGCTG
AAGAAGCAGTTTTACAAATGGAGCTTATAGGACATGACTTCTTTGTATTCCAAGATCCAGAGACAAATCAACTAAATGTA
GTTTATAAAAGAAAAGATGGTAATTATGGTTTAATTGAACCAGGATTAGGCGAAGAATAA

Upstream 100 bases:

>100_bases
TAAAACTTGTATAAAATCTTTTAAAAGAGTAAAATTATAATATAATATTTAAACCTTTACATTGATTGAGGTTACTTGTT
TTTTGAAAGGGGCTGACGAT

Downstream 100 bases:

>100_bases
TAGAATAAATATAAAAAAAGATGTAGGTTTTTACCTACATCTTTTTATTTTTATGTAAAAGTTTTATCTAAATTATTACA
TTTATTGAAAATAGGTTACT

Product: 30S ribosomal protein S30AE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKVTVHAKNIELTNALKDCVEKKISKLSKYFEPGVEAKATLSVEKNKQIVEIMIPFNGILLRGEESTDDMYKSIDLVEEK
IERQIRKQKTRLSKKNRYDSLRFAHIDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV
VYKRKDGNYGLIEPGLGEE

Sequences:

>Translated_179_residues
MKVTVHAKNIELTNALKDCVEKKISKLSKYFEPGVEAKATLSVEKNKQIVEIMIPFNGILLRGEESTDDMYKSIDLVEEK
IERQIRKQKTRLSKKNRYDSLRFAHIDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV
VYKRKDGNYGLIEPGLGEE
>Mature_179_residues
MKVTVHAKNIELTNALKDCVEKKISKLSKYFEPGVEAKATLSVEKNKQIVEIMIPFNGILLRGEESTDDMYKSIDLVEEK
IERQIRKQKTRLSKKNRYDSLRFAHIDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV
VYKRKDGNYGLIEPGLGEE

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 20719; Mature: 20719

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTVHAKNIELTNALKDCVEKKISKLSKYFEPGVEAKATLSVEKNKQIVEIMIPFNGIL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCEE
LRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRYDSLRFAHIDPIEDMKEEKEAKI
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHE
VKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRKDGNYGLIEPGLGEE
EHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKVTVHAKNIELTNALKDCVEKKISKLSKYFEPGVEAKATLSVEKNKQIVEIMIPFNGIL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCEE
LRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRYDSLRFAHIDPIEDMKEEKEAKI
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHE
VKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRKDGNYGLIEPGLGEE
EHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377; 1901557 [H]