| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ywaD [H]
Identifier: 18311151
GI number: 18311151
Start: 2486599
End: 2487942
Strand: Direct
Name: ywaD [H]
Synonym: CPE2169
Alternate gene names: 18311151
Gene position: 2486599-2487942 (Clockwise)
Preceding gene: 18311148
Following gene: 18311158
Centisome position: 82.03
GC content: 28.27
Gene sequence:
>1344_bases ATGAAAAAATTATATATAGCCACAATAAATATACTTCTTTGTACATTTATTTTGCTTATACAACTCTCTCTAGTTTATAA AAATAGGCTTGATCCCTTTGAAAGAGAAGGTGTTTTAAAGAATATAGAATACTTAACCTCTGATGAATTAGAAGGAAGAC TTTGCGGAAATGAAGGTAATTACTTAGCTCAAGAATTCATTGAAAATTCTTTTATTAAATCAAACATAAAAAAACTTAAT TCTAGTTATCTTCAAGATTTCAATGTAAAAGCCCCTATTTTAGTTGAAGGAGAGCCTTATTTAAAAGTTTACGATAAAAA TAATAAGTTAGTATCTTCATATAAATATGGAGTAGATTTTAAAGAAGCCTTTATAAACTTTAGGGTAAATCATATAACTT TTGATAATACAAATGAGTTTAAAGTTCTTCCTACAATAATGAAAGGAACTTCTTCATCTAATAACAGTATTGTATTTCTC TCATCTCCAGTAGATTCTTTTAATTTTAGAAGCTCTTTTATTGAGGATACACCTTGTGACTTATATGTGGTAGTAGCTCC AAATCTTATAAAAGAACTAGAGACATATTTAAATAAAGGTTACAAAATAGACTGTTTTATCCCTTATGAGGTTAAAGAGA AAGTTGTTAATAATGTTACTGGAATTATAAAAGGTAAAAATCCATTTTTGCCTCCTTTAGTCTTAACAGCTCATTTTGAT CATATGGGAAAAGGACTTTCTGGTGAAATTTATAGAGGTGCTTTAGATAATGCTTCTGGTGCTTCATTTTTATTAGAATT AAGTTCTTTCCTAGCTTCTCTTCCTCAACCATCAAGAGATATAATAATAGTCTCTCTAAATGCTGAAGAATTTGGATTAC TAGGTTCTAAAAATTTTGCTAAGGAAAATAAAGACTTATTAAAAAATGCTACAGTTATTAACTTTGATATGATTGGAAGT GATAAAGATATCCCACTCACATTTATGGCAGGAGAAGATACTTGCTTACACAGTGATTTACTAGATAGGCTTTGTGAAAT TTGTAATGAAAAGAACATAACTAATATTATAGAAAATAAAGATTCCTCTGACCACGCAAGCTTTATTAAAGAAGGTTTTG ATGCAATAACAATAAATGATGGTGATGTAACAAGAATTCACACACCAGAAGATAAAATTGAATATATAAGTCCTACAGCC ATAGATAGAAGTTTCTCTGTGGTGTGGAGCGAGATATTTGATTCAGCTTACTCATCCTCTGGATTATTCTTATTAGACTC AAAAGTTCTTATATTACTAATATTATCAGCTTTAATTTGTTTAATATTAAAGTTAAAAAGTTAA
Upstream 100 bases:
>100_bases ATGTTTTATCTATTAATTTAATATTAATAGTAATTTTTTGAATAAACATAATTTAAATCTCATACTTTTAATTATAACCT AATTATTTATGGAGGATAAT
Downstream 100 bases:
>100_bases ATTATATAATTAAAAAAGATAAAATTTAAAAATGCTTATACAAAAATAACTTATAAATAGTATTAAGAGAATATTTAAAT AAAAATTAGAATTTAAGCCC
Product: peptidase family protein
Products: NA
Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKKLYIATINILLCTFILLIQLSLVYKNRLDPFEREGVLKNIEYLTSDELEGRLCGNEGNYLAQEFIENSFIKSNIKKLN SSYLQDFNVKAPILVEGEPYLKVYDKNNKLVSSYKYGVDFKEAFINFRVNHITFDNTNEFKVLPTIMKGTSSSNNSIVFL SSPVDSFNFRSSFIEDTPCDLYVVVAPNLIKELETYLNKGYKIDCFIPYEVKEKVVNNVTGIIKGKNPFLPPLVLTAHFD HMGKGLSGEIYRGALDNASGASFLLELSSFLASLPQPSRDIIIVSLNAEEFGLLGSKNFAKENKDLLKNATVINFDMIGS DKDIPLTFMAGEDTCLHSDLLDRLCEICNEKNITNIIENKDSSDHASFIKEGFDAITINDGDVTRIHTPEDKIEYISPTA IDRSFSVVWSEIFDSAYSSSGLFLLDSKVLILLILSALICLILKLKS
Sequences:
>Translated_447_residues MKKLYIATINILLCTFILLIQLSLVYKNRLDPFEREGVLKNIEYLTSDELEGRLCGNEGNYLAQEFIENSFIKSNIKKLN SSYLQDFNVKAPILVEGEPYLKVYDKNNKLVSSYKYGVDFKEAFINFRVNHITFDNTNEFKVLPTIMKGTSSSNNSIVFL SSPVDSFNFRSSFIEDTPCDLYVVVAPNLIKELETYLNKGYKIDCFIPYEVKEKVVNNVTGIIKGKNPFLPPLVLTAHFD HMGKGLSGEIYRGALDNASGASFLLELSSFLASLPQPSRDIIIVSLNAEEFGLLGSKNFAKENKDLLKNATVINFDMIGS DKDIPLTFMAGEDTCLHSDLLDRLCEICNEKNITNIIENKDSSDHASFIKEGFDAITINDGDVTRIHTPEDKIEYISPTA IDRSFSVVWSEIFDSAYSSSGLFLLDSKVLILLILSALICLILKLKS >Mature_447_residues MKKLYIATINILLCTFILLIQLSLVYKNRLDPFEREGVLKNIEYLTSDELEGRLCGNEGNYLAQEFIENSFIKSNIKKLN SSYLQDFNVKAPILVEGEPYLKVYDKNNKLVSSYKYGVDFKEAFINFRVNHITFDNTNEFKVLPTIMKGTSSSNNSIVFL SSPVDSFNFRSSFIEDTPCDLYVVVAPNLIKELETYLNKGYKIDCFIPYEVKEKVVNNVTGIIKGKNPFLPPLVLTAHFD HMGKGLSGEIYRGALDNASGASFLLELSSFLASLPQPSRDIIIVSLNAEEFGLLGSKNFAKENKDLLKNATVINFDMIGS DKDIPLTFMAGEDTCLHSDLLDRLCEICNEKNITNIIENKDSSDHASFIKEGFDAITINDGDVTRIHTPEDKIEYISPTA IDRSFSVVWSEIFDSAYSSSGLFLLDSKVLILLILSALICLILKLKS
Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 - InterPro: IPR003137 [H]
Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]
EC number: =3.4.11.6; =3.4.11.10 [H]
Molecular weight: Translated: 50197; Mature: 50197
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLYIATINILLCTFILLIQLSLVYKNRLDPFEREGVLKNIEYLTSDELEGRLCGNEGN CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCEEECCCCC YLAQEFIENSFIKSNIKKLNSSYLQDFNVKAPILVEGEPYLKVYDKNNKLVSSYKYGVDF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCEEEHEECCCCH KEAFINFRVNHITFDNTNEFKVLPTIMKGTSSSNNSIVFLSSPVDSFNFRSSFIEDTPCD HHHHHEEEEEEEEECCCCCEEEEEHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCC LYVVVAPNLIKELETYLNKGYKIDCFIPYEVKEKVVNNVTGIIKGKNPFLPPLVLTAHFD EEEEECCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCHHEEEECCCCCCCHHHEEECHH HMGKGLSGEIYRGALDNASGASFLLELSSFLASLPQPSRDIIIVSLNAEEFGLLGSKNFA HHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCCHH KENKDLLKNATVINFDMIGSDKDIPLTFMAGEDTCLHSDLLDRLCEICNEKNITNIIENK HHHHHHHHCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCC DSSDHASFIKEGFDAITINDGDVTRIHTPEDKIEYISPTAIDRSFSVVWSEIFDSAYSSS CCCHHHHHHHCCCCEEEECCCCEEEEECCCHHHEECCCHHCCCHHHHHHHHHHHHHHCCC GLFLLDSKVLILLILSALICLILKLKS CEEEECHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLYIATINILLCTFILLIQLSLVYKNRLDPFEREGVLKNIEYLTSDELEGRLCGNEGN CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCEEECCCCC YLAQEFIENSFIKSNIKKLNSSYLQDFNVKAPILVEGEPYLKVYDKNNKLVSSYKYGVDF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCEEEHEECCCCH KEAFINFRVNHITFDNTNEFKVLPTIMKGTSSSNNSIVFLSSPVDSFNFRSSFIEDTPCD HHHHHEEEEEEEEECCCCCEEEEEHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCC LYVVVAPNLIKELETYLNKGYKIDCFIPYEVKEKVVNNVTGIIKGKNPFLPPLVLTAHFD EEEEECCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCHHEEEECCCCCCCHHHEEECHH HMGKGLSGEIYRGALDNASGASFLLELSSFLASLPQPSRDIIIVSLNAEEFGLLGSKNFA HHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCCHH KENKDLLKNATVINFDMIGSDKDIPLTFMAGEDTCLHSDLLDRLCEICNEKNITNIIENK HHHHHHHHCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCC DSSDHASFIKEGFDAITINDGDVTRIHTPEDKIEYISPTAIDRSFSVVWSEIFDSAYSSS CCCHHHHHHHCCCCEEEECCCCEEEEECCCHHHEECCCHHCCCHHHHHHHHHHHHHHCCC GLFLLDSKVLILLILSALICLILKLKS CEEEECHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 1806041 [H]