| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311092
Identifier: 18311092
GI number: 18311092
Start: 2420422
End: 2421111
Strand: Direct
Name: 18311092
Synonym: CPE2110
Alternate gene names: NA
Gene position: 2420422-2421111 (Clockwise)
Preceding gene: 18311085
Following gene: 18311093
Centisome position: 79.84
GC content: 28.99
Gene sequence:
>690_bases ATGGAAGCTGGTTTAGTTAATCTAATTACAAGCAAAGATGAAAACTGGGACAAAAGATGGAAGTATAACTGTGCAATGTT TATATTATGTTATATTTTCATGGGGGCTGTCACAGGAATAACTAATGACTCTTATTTATCTTATTTAAACATCACTGTTC CTAATGTAGTTAAAGCACTTCCTACCTATGCATCAATTGGAACCTTCATAATAGCAATGCTTTTACTATTAACTCATAAA GTAGGATTCAAGAAATTAATATTACTTGCACCTATTCTTTCAGTTCTTGGTTTATTGGTTTGTATATATAGCAAAAATGG TTTAATCATAACCTTTGCATATATAGTTGTCAATGTTGGTTTAGGAATGTTTGACTGTATTTATCCTGTAATGTTTACAT CATATACTCCTAGAAAAGAAAGAACTAAAATGTTCTCTAGAGTTATGTACTGTAACCTTATTAGCCAATCAATTTTAACA TTTTTCAATGGTAAAATTGTTGTTTGGAAATTTGCTAAATCTTTAGGTGTCTCTTATGATAATGCTTCTGTTTTATCAGA AAATCAAGATGCCTTAAGTTCTGTTCAATTAATGGCATATTCAGATTCATATAAATTTGTACTTTGGATTGCAATAGCCT TAACAGTAATAGCTTCAGTCTTTCTATTATTCTTAAAAGAAAAAAGTTAA
Upstream 100 bases:
>100_bases TTTTTCTTAATGTATTTTTTATTGTTTTGATTTTTTTATCTATAAAGAGTTATTATTAAATTGAAAATTTAAATAAATTT ATAAAATTGGGGGAATTTAT
Downstream 100 bases:
>100_bases GATTATAGAGAAACTCCTGAAGAAATTCAAGCTAGAAAAGGAGAAAAAGCCTTTGATTTCAAATTATTCGCTAATAAATA TGTTATCTTATGGATTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Of Facilitator Superfamily
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKALPTYASIGTFIIAMLLLLTHK VGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVGLGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILT FFNGKIVVWKFAKSLGVSYDNASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS
Sequences:
>Translated_229_residues MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKALPTYASIGTFIIAMLLLLTHK VGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVGLGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILT FFNGKIVVWKFAKSLGVSYDNASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS >Mature_229_residues MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKALPTYASIGTFIIAMLLLLTHK VGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVGLGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILT FFNGKIVVWKFAKSLGVSYDNASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25747; Mature: 25747
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKAL CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCHHHHHHHH PTYASIGTFIIAMLLLLTHKVGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHC LGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILTFFNGKIVVWKFAKSLGVSYD CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCC NASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS CHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAGLVNLITSKDENWDKRWKYNCAMFILCYIFMGAVTGITNDSYLSYLNITVPNVVKAL CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCHHHHHHHH PTYASIGTFIIAMLLLLTHKVGFKKLILLAPILSVLGLLVCIYSKNGLIITFAYIVVNVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHC LGMFDCIYPVMFTSYTPRKERTKMFSRVMYCNLISQSILTFFNGKIVVWKFAKSLGVSYD CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCC NASVLSENQDALSSVQLMAYSDSYKFVLWIAIALTVIASVFLLFLKEKS CHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA