Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311090

Identifier: 18311090

GI number: 18311090

Start: 2418438

End: 2419484

Strand: Reverse

Name: 18311090

Synonym: CPE2108

Alternate gene names: NA

Gene position: 2419484-2418438 (Counterclockwise)

Preceding gene: 18311091

Following gene: 18311089

Centisome position: 79.81

GC content: 25.69

Gene sequence:

>1047_bases
ATGTCAAATAAAAATAAAATAATTATAGGATTAGCCTCATTTTTGGTTTTAATTGCCGTAGGTTTTGCTGCTAAATCAAA
AATGAATGTGAAAAATAATAGTGTTATGGAGGAAGCTGTTGTTTCTAGTGCCTCTGAGAATAGTGAAGAAGTTAATGAAA
AAGATAAAGATATGACTAAAGAAGAAAATTCTAATGATGATACAACTAGCAGTGCATCTAAAAATGATGAAGATGTAAAC
GGTGATATTAAAAATAATACAGATAGTAATAAAAAAGATGCCTTAAGTAGTGCATCAAGTAAAGATAATAGTAAATCAAA
AATTTCAAGTCAAATAAATTCTAAAGGTATAACTTCAAGTAAAGATAAATCAAATGCAATAAGTAGTGCTTCAATAAAAA
CTAATACTTCTAAAAATGGATTTGAAGCTATAAGTCAAAGTCAACCTAGTTCTAGCAAAGTAAATAAAAATAATTTAAGT
AAAGATGTAATAAGCAGTGCTTCTGTAAAGTCTAATAATTCTAGCAAAACAGGTGGAGCTATAAATAAAGATCAGCTTAT
TTCTAAAAATTCAGATGAAAATAATGTGAAAAAAGATACAGTAAGTAGTGCTTCAGAAAATAATCATGGAACAAATTCAA
AAGAAAATAACATAAATAATCAAGTGGTAAGTAAAGTAGAAAATAATAGTGTTAAGGATGCAATAAGTAGTGCCTCTAAA
GAAGAAAAACATAATAGTATAAAGGATTTAACTAATAACAATAGTACAAAATCAGGTTCATTTATAGAAAAAGCTATAAA
TGAAAAATATACAAAATTAGTTGATTTAGGTTGGGTTAAGTATATAGTAGTTACTTTTAATCAAGGAACTATAAATGATT
ATGATTTATATGTTTTAGATAATGGAAATTACAAACCTATAAATCCAAGTAATGTTGATGACAGTGGAAAAATTGTTAAA
TGGGAAATAGATAAATTAGGCTACAATACAATAAAAGTTAAAAGTAAGAAAACTGGAGAAGAAGGAACTTATAAGTTTGT
AAAGTAA

Upstream 100 bases:

>100_bases
TTGAAGTGTAATATAATATTAATGAAAATCATTATCAATTAGGTAAAATTAAATTAGGGGGGAACAAATTAATTTTATAA
AAATTTTAAGGGGGATAAAC

Downstream 100 bases:

>100_bases
GGGGTGAAGGTAATGAATAAGAAAAAACTAAGTATATTAACAGCTATTATAGCAATATCAGCGTGTTCAATTTCAAAAAC
AGCTAGTGCGGCACCAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSNKNKIIIGLASFLVLIAVGFAAKSKMNVKNNSVMEEAVVSSASENSEEVNEKDKDMTKEENSNDDTTSSASKNDEDVN
GDIKNNTDSNKKDALSSASSKDNSKSKISSQINSKGITSSKDKSNAISSASIKTNTSKNGFEAISQSQPSSSKVNKNNLS
KDVISSASVKSNNSSKTGGAINKDQLISKNSDENNVKKDTVSSASENNHGTNSKENNINNQVVSKVENNSVKDAISSASK
EEKHNSIKDLTNNNSTKSGSFIEKAINEKYTKLVDLGWVKYIVVTFNQGTINDYDLYVLDNGNYKPINPSNVDDSGKIVK
WEIDKLGYNTIKVKSKKTGEEGTYKFVK

Sequences:

>Translated_348_residues
MSNKNKIIIGLASFLVLIAVGFAAKSKMNVKNNSVMEEAVVSSASENSEEVNEKDKDMTKEENSNDDTTSSASKNDEDVN
GDIKNNTDSNKKDALSSASSKDNSKSKISSQINSKGITSSKDKSNAISSASIKTNTSKNGFEAISQSQPSSSKVNKNNLS
KDVISSASVKSNNSSKTGGAINKDQLISKNSDENNVKKDTVSSASENNHGTNSKENNINNQVVSKVENNSVKDAISSASK
EEKHNSIKDLTNNNSTKSGSFIEKAINEKYTKLVDLGWVKYIVVTFNQGTINDYDLYVLDNGNYKPINPSNVDDSGKIVK
WEIDKLGYNTIKVKSKKTGEEGTYKFVK
>Mature_347_residues
SNKNKIIIGLASFLVLIAVGFAAKSKMNVKNNSVMEEAVVSSASENSEEVNEKDKDMTKEENSNDDTTSSASKNDEDVNG
DIKNNTDSNKKDALSSASSKDNSKSKISSQINSKGITSSKDKSNAISSASIKTNTSKNGFEAISQSQPSSSKVNKNNLSK
DVISSASVKSNNSSKTGGAINKDQLISKNSDENNVKKDTVSSASENNHGTNSKENNINNQVVSKVENNSVKDAISSASKE
EKHNSIKDLTNNNSTKSGSFIEKAINEKYTKLVDLGWVKYIVVTFNQGTINDYDLYVLDNGNYKPINPSNVDDSGKIVKW
EIDKLGYNTIKVKSKKTGEEGTYKFVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37662; Mature: 37531

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKNKIIIGLASFLVLIAVGFAAKSKMNVKNNSVMEEAVVSSASENSEEVNEKDKDMTK
CCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EENSNDDTTSSASKNDEDVNGDIKNNTDSNKKDALSSASSKDNSKSKISSQINSKGITSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
KDKSNAISSASIKTNTSKNGFEAISQSQPSSSKVNKNNLSKDVISSASVKSNNSSKTGGA
CCHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
INKDQLISKNSDENNVKKDTVSSASENNHGTNSKENNINNQVVSKVENNSVKDAISSASK
CCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
EEKHNSIKDLTNNNSTKSGSFIEKAINEKYTKLVDLGWVKYIVVTFNQGTINDYDLYVLD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEE
NGNYKPINPSNVDDSGKIVKWEIDKLGYNTIKVKSKKTGEEGTYKFVK
CCCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEEECCCCCCCCCEECCC
>Mature Secondary Structure 
SNKNKIIIGLASFLVLIAVGFAAKSKMNVKNNSVMEEAVVSSASENSEEVNEKDKDMTK
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EENSNDDTTSSASKNDEDVNGDIKNNTDSNKKDALSSASSKDNSKSKISSQINSKGITSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
KDKSNAISSASIKTNTSKNGFEAISQSQPSSSKVNKNNLSKDVISSASVKSNNSSKTGGA
CCHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
INKDQLISKNSDENNVKKDTVSSASENNHGTNSKENNINNQVVSKVENNSVKDAISSASK
CCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
EEKHNSIKDLTNNNSTKSGSFIEKAINEKYTKLVDLGWVKYIVVTFNQGTINDYDLYVLD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEE
NGNYKPINPSNVDDSGKIVKWEIDKLGYNTIKVKSKKTGEEGTYKFVK
CCCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEEECCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA