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The map label for this gene is 18311084

Identifier: 18311084

GI number: 18311084

Start: 2409786

End: 2411543

Strand: Reverse

Name: 18311084

Synonym: CPE2102

Alternate gene names: NA

Gene position: 2411543-2409786 (Counterclockwise)

Preceding gene: 18311086

Following gene: 18311083

Centisome position: 79.55

GC content: 28.16

Gene sequence:

>1758_bases
ATGAAAAAAAATGCGGCTCAAAGGGAGTATAAAAAATTATCAGGTCAAATAAATCAAATAGAAAACATAGTAAGACATTC
AAAAGCAGGAGCACTTTTTGAACATGAATCAACCTTAAGAAAAAAAATATTGCAATTAAAAGAGATGAAAGATCAAGGGT
TAAAAGGATATGAATCTCTTTATGATAGATATGAAGAATTATTAGAAGCGGTAGGAAAGAGAATTCTAGAGAATTATAAT
AAGAAAAATGATACTAATTTTGATTTTTATGAAGTCTTAAGAAACAATTATAATGTATTTCTTAATTCAGGAATTATGAC
TCTTCTTGTAAAACATCATATTCCAGAGTTAATATCTAAGGAATTTGATGAGAAGTTTCCAGCAAATCCAAAGGATGAAT
ATCTTCATACAAGAAGGCTTAAAAGAAAGTTCTATCTGCATTTAGGAGAAACGAATACTGGAAAAACCTATACTGCTATG
CAGAGACTTAAAGAGGTTAGAAAAGGAGTATATTTATCTCCTCTTAGAATTTTAGCCTTAGAAAACTTTGAAAGATTAAA
TAATGAGGGTGTTAAATGTAATCTTCTTACTGGAGAAGAAGAAATATTATTTGAAGATGCAACACATGTATCCTGTACCA
TAGAAAAGGCTAATATACATGAAAGATATGATGTGGCAGTTATAGATGAAATTCAAATGATAGATGATTCACAAAGAGGG
TATGCTTGGACTAGAGCTTTACTTGGTTTATATTGTACTGAAATACATATATGTGGAGCCTTTAATGCTAAGAATATATT
AAAAGAAATTATAGAAGATTGTGGAGATGACTATGAGATTATAGAATATCATAGAGATATTCCACTTATTGTAGAAGATG
AAAGTTTTCATCCAAAAAATGTTCAAGAGGGAGATGCCTTAGTTTTATTTTCAAAGAAAAAAGTTCTTCAAATGGCTGAG
CAATATTCACAGATGGGAATTAAATGCTCCATAATCTATGGAGATTTACCACCAGAGGTTAGAAAAAAACAGTATGAAGA
ATTTATAACGGGAAAAAATAAAATTTTAATAACAACTGATGCCATTGGAATGGGAGTTAATCTTCCTATAAAGAGAATTA
TTTTCTTATCAATAAGCAAATTTGATGGAGAGCAAATGAGAGAGTTAACTTCTCAGGAGGTTAAACAAATTGCAGGAAGA
GCAGGAAGAAAAGGCATATATGATACGGGATATGTAGCTACTTATAGAGATAATAAGGAATTTATTGAAGAGAGATTAGA
GGAAGAGGATATTAGTATAAAAAGAGCAGTTTTAGGACCTTCAGATGCAATATTAGAAATTGATAATCTTCCTTTAAATG
AAAAATTAGCTTTATGGAGTACAAAGAAATGTGAAGTTCCATACTATAGAAAAATGGATATAAGTGAATATTTAATAATA
TTAGAAAGATTAAAATCATATAAACTTCTTGAAGAAATTCAATGGGAGCTTTTAAAAATTCCTTTTGATATATCTAAAGA
TGACTTAATGAATCAATTTTTAAATTTTGTTGATCAGCTATTTATAAATGATCAAGAAGAACTATTTAAACCTCAATGTT
ACTCAGGAACTTTATATGACTTAGAAACTTATTATCAAATGGTAAATATGTATTATTCTTTTAGCAAGAGATTTAATTTA
AATTTTGACTTAGAGTGGATTGAAAATGAAAGACTTACTGTAAGTGAAGAAATAAATAATATTCTTATGAGAATTTAA

Upstream 100 bases:

>100_bases
GGAGAGAAAAATTTTAACTGTTTGAGATATTTATAGAAAAAGATTACAATGAAAATATATAGGTTAAATTATTATAGAAT
TTTAATTCGGAGGAATTTTA

Downstream 100 bases:

>100_bases
TAGGTGATTTTATGAGAGTTTTAAATTTAAAAATAACTTTAAGAGCATCTTGGGTACATTCTTTAAAAGAAAAAAGAATG
GTGGTTAAGAGCATAGTTCA

Product: helicase domain protein

Products: NA

Alternate protein names: Helicase Domain Protein; Helicase; Helicase-Like; Helicase Conserved C-Terminal Domain Protein; ATP-Dependent Helicase; ATP-Dependent RNA Helicase; ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase Protein; MgpS ATP-Dependent Helicase; RNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Superfamily II DNA And RNA Helicase; ATP-Dependent RNA And DNA Helicase; ATP Dependent RNA Helicase; Adenosinetriphosphatase; DeaD/DeaH Box Helicase; RNA Helicase RhrA; ATP-Dependent Helicase MgpS; ATP-Dependent RNA Helicase Superfamily II; Helicase C-Terminal Domain Protein; DNA Helicase; ATP-Dependent DNA And RNA Helicase Protein

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MKKNAAQREYKKLSGQINQIENIVRHSKAGALFEHESTLRKKILQLKEMKDQGLKGYESLYDRYEELLEAVGKRILENYN
KKNDTNFDFYEVLRNNYNVFLNSGIMTLLVKHHIPELISKEFDEKFPANPKDEYLHTRRLKRKFYLHLGETNTGKTYTAM
QRLKEVRKGVYLSPLRILALENFERLNNEGVKCNLLTGEEEILFEDATHVSCTIEKANIHERYDVAVIDEIQMIDDSQRG
YAWTRALLGLYCTEIHICGAFNAKNILKEIIEDCGDDYEIIEYHRDIPLIVEDESFHPKNVQEGDALVLFSKKKVLQMAE
QYSQMGIKCSIIYGDLPPEVRKKQYEEFITGKNKILITTDAIGMGVNLPIKRIIFLSISKFDGEQMRELTSQEVKQIAGR
AGRKGIYDTGYVATYRDNKEFIEERLEEEDISIKRAVLGPSDAILEIDNLPLNEKLALWSTKKCEVPYYRKMDISEYLII
LERLKSYKLLEEIQWELLKIPFDISKDDLMNQFLNFVDQLFINDQEELFKPQCYSGTLYDLETYYQMVNMYYSFSKRFNL
NFDLEWIENERLTVSEEINNILMRI

Sequences:

>Translated_585_residues
MKKNAAQREYKKLSGQINQIENIVRHSKAGALFEHESTLRKKILQLKEMKDQGLKGYESLYDRYEELLEAVGKRILENYN
KKNDTNFDFYEVLRNNYNVFLNSGIMTLLVKHHIPELISKEFDEKFPANPKDEYLHTRRLKRKFYLHLGETNTGKTYTAM
QRLKEVRKGVYLSPLRILALENFERLNNEGVKCNLLTGEEEILFEDATHVSCTIEKANIHERYDVAVIDEIQMIDDSQRG
YAWTRALLGLYCTEIHICGAFNAKNILKEIIEDCGDDYEIIEYHRDIPLIVEDESFHPKNVQEGDALVLFSKKKVLQMAE
QYSQMGIKCSIIYGDLPPEVRKKQYEEFITGKNKILITTDAIGMGVNLPIKRIIFLSISKFDGEQMRELTSQEVKQIAGR
AGRKGIYDTGYVATYRDNKEFIEERLEEEDISIKRAVLGPSDAILEIDNLPLNEKLALWSTKKCEVPYYRKMDISEYLII
LERLKSYKLLEEIQWELLKIPFDISKDDLMNQFLNFVDQLFINDQEELFKPQCYSGTLYDLETYYQMVNMYYSFSKRFNL
NFDLEWIENERLTVSEEINNILMRI
>Mature_585_residues
MKKNAAQREYKKLSGQINQIENIVRHSKAGALFEHESTLRKKILQLKEMKDQGLKGYESLYDRYEELLEAVGKRILENYN
KKNDTNFDFYEVLRNNYNVFLNSGIMTLLVKHHIPELISKEFDEKFPANPKDEYLHTRRLKRKFYLHLGETNTGKTYTAM
QRLKEVRKGVYLSPLRILALENFERLNNEGVKCNLLTGEEEILFEDATHVSCTIEKANIHERYDVAVIDEIQMIDDSQRG
YAWTRALLGLYCTEIHICGAFNAKNILKEIIEDCGDDYEIIEYHRDIPLIVEDESFHPKNVQEGDALVLFSKKKVLQMAE
QYSQMGIKCSIIYGDLPPEVRKKQYEEFITGKNKILITTDAIGMGVNLPIKRIIFLSISKFDGEQMRELTSQEVKQIAGR
AGRKGIYDTGYVATYRDNKEFIEERLEEEDISIKRAVLGPSDAILEIDNLPLNEKLALWSTKKCEVPYYRKMDISEYLII
LERLKSYKLLEEIQWELLKIPFDISKDDLMNQFLNFVDQLFINDQEELFKPQCYSGTLYDLETYYQMVNMYYSFSKRFNL
NFDLEWIENERLTVSEEINNILMRI

Specific function: Unknown

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543667, Length=470, Percent_Identity=33.1914893617021, Blast_Score=243, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI115532782, Length=356, Percent_Identity=38.2022471910112, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI115532784, Length=356, Percent_Identity=38.2022471910112, Blast_Score=240, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6325228, Length=332, Percent_Identity=39.7590361445783, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6323430, Length=83, Percent_Identity=44.578313253012, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221329989, Length=332, Percent_Identity=38.855421686747, Blast_Score=231, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68769; Mature: 68769

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNAAQREYKKLSGQINQIENIVRHSKAGALFEHESTLRKKILQLKEMKDQGLKGYESL
CCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YDRYEELLEAVGKRILENYNKKNDTNFDFYEVLRNNYNVFLNSGIMTLLVKHHIPELISK
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
EFDEKFPANPKDEYLHTRRLKRKFYLHLGETNTGKTYTAMQRLKEVRKGVYLSPLRILAL
HHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
ENFERLNNEGVKCNLLTGEEEILFEDATHVSCTIEKANIHERYDVAVIDEIQMIDDSQRG
HHHHHHCCCCCEEEEECCCHHHEEECCCEEEEEEEECCCCCCCCEEEEHHHHHHCCCCCC
YAWTRALLGLYCTEIHICGAFNAKNILKEIIEDCGDDYEIIEYHRDIPLIVEDESFHPKN
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCC
VQEGDALVLFSKKKVLQMAEQYSQMGIKCSIIYGDLPPEVRKKQYEEFITGKNKILITTD
CCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC
AIGMGVNLPIKRIIFLSISKFDGEQMRELTSQEVKQIAGRAGRKGIYDTGYVATYRDNKE
CCCCCCCCCHHHEEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHH
FIEERLEEEDISIKRAVLGPSDAILEIDNLPLNEKLALWSTKKCEVPYYRKMDISEYLII
HHHHHHHHHCCHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH
LERLKSYKLLEEIQWELLKIPFDISKDDLMNQFLNFVDQLFINDQEELFKPQCYSGTLYD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHH
LETYYQMVNMYYSFSKRFNLNFDLEWIENERLTVSEEINNILMRI
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MKKNAAQREYKKLSGQINQIENIVRHSKAGALFEHESTLRKKILQLKEMKDQGLKGYESL
CCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YDRYEELLEAVGKRILENYNKKNDTNFDFYEVLRNNYNVFLNSGIMTLLVKHHIPELISK
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
EFDEKFPANPKDEYLHTRRLKRKFYLHLGETNTGKTYTAMQRLKEVRKGVYLSPLRILAL
HHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
ENFERLNNEGVKCNLLTGEEEILFEDATHVSCTIEKANIHERYDVAVIDEIQMIDDSQRG
HHHHHHCCCCCEEEEECCCHHHEEECCCEEEEEEEECCCCCCCCEEEEHHHHHHCCCCCC
YAWTRALLGLYCTEIHICGAFNAKNILKEIIEDCGDDYEIIEYHRDIPLIVEDESFHPKN
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCC
VQEGDALVLFSKKKVLQMAEQYSQMGIKCSIIYGDLPPEVRKKQYEEFITGKNKILITTD
CCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEC
AIGMGVNLPIKRIIFLSISKFDGEQMRELTSQEVKQIAGRAGRKGIYDTGYVATYRDNKE
CCCCCCCCCHHHEEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHH
FIEERLEEEDISIKRAVLGPSDAILEIDNLPLNEKLALWSTKKCEVPYYRKMDISEYLII
HHHHHHHHHCCHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH
LERLKSYKLLEEIQWELLKIPFDISKDDLMNQFLNFVDQLFINDQEELFKPQCYSGTLYD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHH
LETYYQMVNMYYSFSKRFNLNFDLEWIENERLTVSEEINNILMRI
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA