| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311082
Identifier: 18311082
GI number: 18311082
Start: 2408956
End: 2409351
Strand: Reverse
Name: 18311082
Synonym: CPE2100
Alternate gene names: NA
Gene position: 2409351-2408956 (Counterclockwise)
Preceding gene: 18311083
Following gene: 18311081
Centisome position: 79.48
GC content: 26.77
Gene sequence:
>396_bases ATGAATCCATACGAAGCACCAGAAAATAACTATATTTTAGTTATGCCTGACGGAAGTGTAGTAGGCTTTGAAGAAAGTGA TATGGCACAGGCATACATAAACAGATATTATCAAGAAAAAATCACTTCTTATTGTGATAAAGTAGATTATTCAGAATATG ATATGACAGAGTGGAAATCAACAGAGAATATATGTACAGCTTTAGGAGCATATGAAGGTTTATGTATTTTATATAAGTTA GAAGACCTTATATCTAGTATTCAGCAATCATCAATATTTGAAGATGAAAAGAATGAATTAATAGCAAAATTAAGATGTAG AAATATAGATATAAATATAAATGATTATCAAATTGATGATATATTATCTAATATTGATGGAGTAATATATCAATAA
Upstream 100 bases:
>100_bases ATGCTGAAAATGGAAAAGTATATTCCAAAACTATATAAGTATAAGGCTTTTAGGTGAGGGGAAACTAAAATAAAATAAAA AAGAGTAGGAGGCGATCAGT
Downstream 100 bases:
>100_bases AAAATATTAAAATTAAATTTAATAAAAAAGGCTTGTATCAAAAGCTAATAAAAAACTTACAAATAATATGAAGATAATGC TTTATAAGTTTTTAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNPYEAPENNYILVMPDGSVVGFEESDMAQAYINRYYQEKITSYCDKVDYSEYDMTEWKSTENICTALGAYEGLCILYKL EDLISSIQQSSIFEDEKNELIAKLRCRNIDININDYQIDDILSNIDGVIYQ
Sequences:
>Translated_131_residues MNPYEAPENNYILVMPDGSVVGFEESDMAQAYINRYYQEKITSYCDKVDYSEYDMTEWKSTENICTALGAYEGLCILYKL EDLISSIQQSSIFEDEKNELIAKLRCRNIDININDYQIDDILSNIDGVIYQ >Mature_131_residues MNPYEAPENNYILVMPDGSVVGFEESDMAQAYINRYYQEKITSYCDKVDYSEYDMTEWKSTENICTALGAYEGLCILYKL EDLISSIQQSSIFEDEKNELIAKLRCRNIDININDYQIDDILSNIDGVIYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15204; Mature: 15204
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPYEAPENNYILVMPDGSVVGFEESDMAQAYINRYYQEKITSYCDKVDYSEYDMTEWKS CCCCCCCCCCEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC TENICTALGAYEGLCILYKLEDLISSIQQSSIFEDEKNELIAKLRCRNIDININDYQIDD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEHHH ILSNIDGVIYQ HHHHHCCEECC >Mature Secondary Structure MNPYEAPENNYILVMPDGSVVGFEESDMAQAYINRYYQEKITSYCDKVDYSEYDMTEWKS CCCCCCCCCCEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC TENICTALGAYEGLCILYKLEDLISSIQQSSIFEDEKNELIAKLRCRNIDININDYQIDD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEHHH ILSNIDGVIYQ HHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA