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The map label for this gene is lplC [H]

Identifier: 18311063

GI number: 18311063

Start: 2388727

End: 2389683

Strand: Reverse

Name: lplC [H]

Synonym: CPE2081

Alternate gene names: 18311063

Gene position: 2389683-2388727 (Counterclockwise)

Preceding gene: 18311064

Following gene: 18311062

Centisome position: 78.83

GC content: 30.62

Gene sequence:

>957_bases
GTGTTAGAAACTATTAAACAAAAAAGACTTCAGAAAAAAGCTGAACCAAAAGAAGAAGTAAACAAGTTTAATGCTGTCTC
AAAAAAGAGTAACTTTTTATTAAATGTTTTATTCGCAATATTAGCTTTCTTAGCAATAATGCCCTTCGTATTTGTTATAG
CTATATCATTAACAAATGAGCAATCATTACAATTAAATGGATATAGATTCATACCAGAAGAGTGGAGCTTAGAAGCTTAT
AAATATATATTCTCATCAGGTAGCCAGATTTTAACATCATATGGGGTTACAATTACTGTTACAATTGTAGGTACTTTAAT
TGGACTAGCTATAATGTCAATGTATGGATATGCTTTATCAAGAAAGAGCTTTGCTTACAGAAAGTTCTTTACTAAAGTAA
TATTTGTACCAATGTTATTCTCAGGTGGTATGGTTGCTTCATACCTAGTAGTTACAAGATTTTTAGGATTAAAGAATACA
ATATGGGCTCTTATACTTCCAATGTGTGTAAGTTCATTCCATATAATTATTTTAAGAACATTCTTTAAGACATCAGTACC
AGACGCTATTATAGAATCAGCTAAAATAGATGGAGCATCAGAGTGGAGATTATTCTTAAGAATAGTATTACCAATCTCTC
TTCCTGGTATAGCAACAATAGGATTATTCTTAACTTTAGGATACTGGAATGACTGGTTCAACGCTATGTTATATATTGAT
GAACCAAACTTAATACCATTACAGTACTTATTAATAAGACTTGAAAACTCAATGGAGTTCTTAGCAAATAATGCAACATC
ACTTGGTGCAAATGCTATAGAAGCTACTAAGAGTATGCCAAAGGATACTGCTAAGATGGCTATAGTTGTTATTTCAACTT
TACCAATAATATTTGCTTATCCATTCTTCCAAAGATACTTTGTAAATGGATTAACAATTGGAGCAGTTAAAGAGTAA

Upstream 100 bases:

>100_bases
ATCAATCATTTGTAGGATTAATACTTATAGTAACTTCTAACGCTATAGTAAGAAAAGTAGATGAAGAAAACGCATTCTTC
TAAAAAAGGTGGTGTAATGT

Downstream 100 bases:

>100_bases
TTAAATAGAATGATATTTTAAAGGGTTGTATCAATAGCAACTTAAAATAAAACTTATAAATATATTTCGAGAATTATTGG
ATTTCGCTAAGAATTTATAG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLETIKQKRLQKKAEPKEEVNKFNAVSKKSNFLLNVLFAILAFLAIMPFVFVIAISLTNEQSLQLNGYRFIPEEWSLEAY
KYIFSSGSQILTSYGVTITVTIVGTLIGLAIMSMYGYALSRKSFAYRKFFTKVIFVPMLFSGGMVASYLVVTRFLGLKNT
IWALILPMCVSSFHIIILRTFFKTSVPDAIIESAKIDGASEWRLFLRIVLPISLPGIATIGLFLTLGYWNDWFNAMLYID
EPNLIPLQYLLIRLENSMEFLANNATSLGANAIEATKSMPKDTAKMAIVVISTLPIIFAYPFFQRYFVNGLTIGAVKE

Sequences:

>Translated_318_residues
MLETIKQKRLQKKAEPKEEVNKFNAVSKKSNFLLNVLFAILAFLAIMPFVFVIAISLTNEQSLQLNGYRFIPEEWSLEAY
KYIFSSGSQILTSYGVTITVTIVGTLIGLAIMSMYGYALSRKSFAYRKFFTKVIFVPMLFSGGMVASYLVVTRFLGLKNT
IWALILPMCVSSFHIIILRTFFKTSVPDAIIESAKIDGASEWRLFLRIVLPISLPGIATIGLFLTLGYWNDWFNAMLYID
EPNLIPLQYLLIRLENSMEFLANNATSLGANAIEATKSMPKDTAKMAIVVISTLPIIFAYPFFQRYFVNGLTIGAVKE
>Mature_318_residues
MLETIKQKRLQKKAEPKEEVNKFNAVSKKSNFLLNVLFAILAFLAIMPFVFVIAISLTNEQSLQLNGYRFIPEEWSLEAY
KYIFSSGSQILTSYGVTITVTIVGTLIGLAIMSMYGYALSRKSFAYRKFFTKVIFVPMLFSGGMVASYLVVTRFLGLKNT
IWALILPMCVSSFHIIILRTFFKTSVPDAIIESAKIDGASEWRLFLRIVLPISLPGIATIGLFLTLGYWNDWFNAMLYID
EPNLIPLQYLLIRLENSMEFLANNATSLGANAIEATKSMPKDTAKMAIVVISTLPIIFAYPFFQRYFVNGLTIGAVKE

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=24.2957746478873, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35829; Mature: 35829

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETIKQKRLQKKAEPKEEVNKFNAVSKKSNFLLNVLFAILAFLAIMPFVFVIAISLTNE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QSLQLNGYRFIPEEWSLEAYKYIFSSGSQILTSYGVTITVTIVGTLIGLAIMSMYGYALS
CCEEECCEEECCCCCCHHHHHHHHHCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH
RKSFAYRKFFTKVIFVPMLFSGGMVASYLVVTRFLGLKNTIWALILPMCVSSFHIIILRT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
FFKTSVPDAIIESAKIDGASEWRLFLRIVLPISLPGIATIGLFLTLGYWNDWFNAMLYID
HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEC
EPNLIPLQYLLIRLENSMEFLANNATSLGANAIEATKSMPKDTAKMAIVVISTLPIIFAY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
PFFQRYFVNGLTIGAVKE
HHHHHHHHCCEEEECCCC
>Mature Secondary Structure
MLETIKQKRLQKKAEPKEEVNKFNAVSKKSNFLLNVLFAILAFLAIMPFVFVIAISLTNE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QSLQLNGYRFIPEEWSLEAYKYIFSSGSQILTSYGVTITVTIVGTLIGLAIMSMYGYALS
CCEEECCEEECCCCCCHHHHHHHHHCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH
RKSFAYRKFFTKVIFVPMLFSGGMVASYLVVTRFLGLKNTIWALILPMCVSSFHIIILRT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
FFKTSVPDAIIESAKIDGASEWRLFLRIVLPISLPGIATIGLFLTLGYWNDWFNAMLYID
HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEC
EPNLIPLQYLLIRLENSMEFLANNATSLGANAIEATKSMPKDTAKMAIVVISTLPIIFAY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
PFFQRYFVNGLTIGAVKE
HHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]