Click here to switch to the map view.

The map label for this gene is ycaI [C]

Identifier: 18311026

GI number: 18311026

Start: 2335601

End: 2337211

Strand: Reverse

Name: ycaI [C]

Synonym: CPE2044

Alternate gene names: 18311026

Gene position: 2337211-2335601 (Counterclockwise)

Preceding gene: 18311027

Following gene: 18311025

Centisome position: 77.1

GC content: 25.33

Gene sequence:

>1611_bases
ATGAAAAAGTTTGAGAAAGTTATTATAAATAGACCTTTAGGATTAATTTGTATTTTTACTATTTTAGGAATTATAACATA
CTACTTTGGTAGTTTTAACTTAATAGGTACAGCTTTTTTAGTTGTACCTTTAATTTTGTTTAGCTATCTTTTATTAGACA
TAGATAATTTTAATATAGGCATAATATTTTTCCTCATAGCTATTTTAAGTTGCACCATCTATTATGAGCCTAAATTTCAA
CAAGAAGGGGTTCAAGAAATAAGGATAATAGAAGTTACAGATAAAGTTATACTAGGAAAGATAGATGGAAGAATAGTTGA
AGTAAGAAACCAAAGTGGAATTGAAATTGAATATGGAGAAAAAATATATGGAGTTTGTAAATTCAAGAGAAATATTAATT
TAGATAGAGGTCATGTTGGACAGGTTTTTTTAAAGAAAGTATTAAAAAGAGAAAAGGACTTAATATATAAAATAAAAAAT
ATACCAAAGAAGTATTATGAAAACTTAAGCAAAAATTTTTCAACCTCTGAAAGTGCACTTTTAAATGCTGTTTTATGGGG
AGATAAAGAAAATTTAACTTATAATCAAAAGGATTTTTTATCAGACTTAGGAGTAATTCATTTAATATGTATATCAGGGT
TTCATATAGCCTTACTTTTTTCAATAATTTATAAAAAGTTTTCTTTTAAGATAGCTTTAAGTATATGTACTATTTATGTA
ATTTTAGTTGGAGCATCTAGTTCAGCATTAAGAGCTTTAATTATGATAACTTTATTAAAGTCTTCTAAAAGGCTATTTAA
GACCTATGACCCATTAAGTTCTATATCCTTAGGAGCAGTGATCTTACTTATTTATAAACCTTATAACCTTTTTAGCATGG
GATTTTTATTATCCTTTGGTGGAACCTTAGGCATAATTTTATTATATAAAAAATTATTAGAGGGATTTTATATGTTACCA
CCAAAGTTAAATGAATACTTAAGCTTAGGACTGTCTGCACAAGCTTTTATATATCCTATTTTGGTAATTGCTTTTGGAAA
ATTTTCTATTAACTTTTTAATATCAACCTTTTTAGTAACTCCAATAATAGTAATATTATTACAGATACTATTAATTTCTA
TTTTAATTGGTGGAAATTTAATTGGAATTATAGTATTTTTAGATAAGGTAGTATGGGTTACCCCTTATTTATCCCCAGTA
TTTGCAATTGCTTATATGACTATGTTTTTATGGGTTTACATGAGCCTTAAAGGATTTAAAAGGTTTAAAATGGGAGTTTA
TTTAGTCATACCTGTTTTGCTTTTAAATTTATATGTATTTGGAGCTAAAATTAAAGTTGTGGAGGATAAATGGAATAAGG
CTGTAGTCATAGAATCTGGATTTAAGAAAGTTGCCTTAGTAAACAATAATAGTGATTATTTTAAAAAATCCATAATGAAA
AAGGAATATGTTAATGAGGTTATTCATTTGAAAAAAGAGTCTCAATTTGAACTAACAAAAAGATATTCAATATCCATAGA
AGATAATTTTAATATAATAACTTTAATGCCAGAGAATAGTGATTATGATATAATTGATTTGATTCAAAAGAAAAGTGCGT
ATATACTTTAA

Upstream 100 bases:

>100_bases
TTTCTTTGGTTACTTAATGGCATTAATATTTAATCCAAAAACTAAATAAATGATTATAATTTCTATAAAAGGTCAATAAT
TTTTTCAAAGGAGAGATTCT

Downstream 100 bases:

>100_bases
CTTATGTAAATAAGTAGCTGGGATTTGAAAGGTTGATATTTTAATGATAGATTTAGACGGTTTATATGAAAATTTGAAAA
AAGGAAAGATAGAAAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: ComEC/Rec2-Related Protein; Competence Protein; ComEC/Rec2 Family Protein; Competence Membrane Protein; ComC Competence Related Protein; Comec/Rec2-Related Protein; DNA Internalization-Like Competence; ComE Operon Protein; ComE Operon; DNA Internalization-Related Competence Protein ComEC; Competence Related Membrane Protein; Integral Membrane Protein; ComEC-Like Cytoplasmic Membrane Protein; Integral Membrane Protein ComE

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKKFEKVIINRPLGLICIFTILGIITYYFGSFNLIGTAFLVVPLILFSYLLLDIDNFNIGIIFFLIAILSCTIYYEPKFQ
QEGVQEIRIIEVTDKVILGKIDGRIVEVRNQSGIEIEYGEKIYGVCKFKRNINLDRGHVGQVFLKKVLKREKDLIYKIKN
IPKKYYENLSKNFSTSESALLNAVLWGDKENLTYNQKDFLSDLGVIHLICISGFHIALLFSIIYKKFSFKIALSICTIYV
ILVGASSSALRALIMITLLKSSKRLFKTYDPLSSISLGAVILLIYKPYNLFSMGFLLSFGGTLGIILLYKKLLEGFYMLP
PKLNEYLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPIIVILLQILLISILIGGNLIGIIVFLDKVVWVTPYLSPV
FAIAYMTMFLWVYMSLKGFKRFKMGVYLVIPVLLLNLYVFGAKIKVVEDKWNKAVVIESGFKKVALVNNNSDYFKKSIMK
KEYVNEVIHLKKESQFELTKRYSISIEDNFNIITLMPENSDYDIIDLIQKKSAYIL

Sequences:

>Translated_536_residues
MKKFEKVIINRPLGLICIFTILGIITYYFGSFNLIGTAFLVVPLILFSYLLLDIDNFNIGIIFFLIAILSCTIYYEPKFQ
QEGVQEIRIIEVTDKVILGKIDGRIVEVRNQSGIEIEYGEKIYGVCKFKRNINLDRGHVGQVFLKKVLKREKDLIYKIKN
IPKKYYENLSKNFSTSESALLNAVLWGDKENLTYNQKDFLSDLGVIHLICISGFHIALLFSIIYKKFSFKIALSICTIYV
ILVGASSSALRALIMITLLKSSKRLFKTYDPLSSISLGAVILLIYKPYNLFSMGFLLSFGGTLGIILLYKKLLEGFYMLP
PKLNEYLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPIIVILLQILLISILIGGNLIGIIVFLDKVVWVTPYLSPV
FAIAYMTMFLWVYMSLKGFKRFKMGVYLVIPVLLLNLYVFGAKIKVVEDKWNKAVVIESGFKKVALVNNNSDYFKKSIMK
KEYVNEVIHLKKESQFELTKRYSISIEDNFNIITLMPENSDYDIIDLIQKKSAYIL
>Mature_536_residues
MKKFEKVIINRPLGLICIFTILGIITYYFGSFNLIGTAFLVVPLILFSYLLLDIDNFNIGIIFFLIAILSCTIYYEPKFQ
QEGVQEIRIIEVTDKVILGKIDGRIVEVRNQSGIEIEYGEKIYGVCKFKRNINLDRGHVGQVFLKKVLKREKDLIYKIKN
IPKKYYENLSKNFSTSESALLNAVLWGDKENLTYNQKDFLSDLGVIHLICISGFHIALLFSIIYKKFSFKIALSICTIYV
ILVGASSSALRALIMITLLKSSKRLFKTYDPLSSISLGAVILLIYKPYNLFSMGFLLSFGGTLGIILLYKKLLEGFYMLP
PKLNEYLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPIIVILLQILLISILIGGNLIGIIVFLDKVVWVTPYLSPV
FAIAYMTMFLWVYMSLKGFKRFKMGVYLVIPVLLLNLYVFGAKIKVVEDKWNKAVVIESGFKKVALVNNNSDYFKKSIMK
KEYVNEVIHLKKESQFELTKRYSISIEDNFNIITLMPENSDYDIIDLIQKKSAYIL

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61233; Mature: 61233

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFEKVIINRPLGLICIFTILGIITYYFGSFNLIGTAFLVVPLILFSYLLLDIDNFNIG
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IIFFLIAILSCTIYYEPKFQQEGVQEIRIIEVTDKVILGKIDGRIVEVRNQSGIEIEYGE
HHHHHHHHHHHEEEECCCHHHCCHHHEEEEEEECCEEEEECCCEEEEEECCCCCEEEECC
KIYGVCKFKRNINLDRGHVGQVFLKKVLKREKDLIYKIKNIPKKYYENLSKNFSTSESAL
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
LNAVLWGDKENLTYNQKDFLSDLGVIHLICISGFHIALLFSIIYKKFSFKIALSICTIYV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVGASSSALRALIMITLLKSSKRLFKTYDPLSSISLGAVILLIYKPYNLFSMGFLLSFG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCHHHHHHHHHCC
GTLGIILLYKKLLEGFYMLPPKLNEYLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVT
HHHHHHHHHHHHHCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIVILLQILLISILIGGNLIGIIVFLDKVVWVTPYLSPVFAIAYMTMFLWVYMSLKGFK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFKMGVYLVIPVLLLNLYVFGAKIKVVEDKWNKAVVIESGFKKVALVNNNSDYFKKSIMK
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHH
KEYVNEVIHLKKESQFELTKRYSISIEDNFNIITLMPENSDYDIIDLIQKKSAYIL
HHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKFEKVIINRPLGLICIFTILGIITYYFGSFNLIGTAFLVVPLILFSYLLLDIDNFNIG
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IIFFLIAILSCTIYYEPKFQQEGVQEIRIIEVTDKVILGKIDGRIVEVRNQSGIEIEYGE
HHHHHHHHHHHEEEECCCHHHCCHHHEEEEEEECCEEEEECCCEEEEEECCCCCEEEECC
KIYGVCKFKRNINLDRGHVGQVFLKKVLKREKDLIYKIKNIPKKYYENLSKNFSTSESAL
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
LNAVLWGDKENLTYNQKDFLSDLGVIHLICISGFHIALLFSIIYKKFSFKIALSICTIYV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVGASSSALRALIMITLLKSSKRLFKTYDPLSSISLGAVILLIYKPYNLFSMGFLLSFG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCHHHHHHHHHCC
GTLGIILLYKKLLEGFYMLPPKLNEYLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVT
HHHHHHHHHHHHHCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIVILLQILLISILIGGNLIGIIVFLDKVVWVTPYLSPVFAIAYMTMFLWVYMSLKGFK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFKMGVYLVIPVLLLNLYVFGAKIKVVEDKWNKAVVIESGFKKVALVNNNSDYFKKSIMK
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHH
KEYVNEVIHLKKESQFELTKRYSISIEDNFNIITLMPENSDYDIIDLIQKKSAYIL
HHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA