The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310978

Identifier: 18310978

GI number: 18310978

Start: 2287239

End: 2287754

Strand: Direct

Name: 18310978

Synonym: CPE1996

Alternate gene names: NA

Gene position: 2287239-2287754 (Clockwise)

Preceding gene: 18310964

Following gene: 18310979

Centisome position: 75.45

GC content: 26.16

Gene sequence:

>516_bases
ATGGATATAGATGATATTAATATACTTATGAAATATCTAAGCAATCTTCCAATGAAAGAATATAAAAAGAATTTTACCTT
TTTAGGAGAAGGAATAGCAAGAAAAGTTTTTGCTTTAAATAAAAATTTAGTGGTTAAAGTTGCTAAGGGTGAAGATGGTC
TTCATCAAAATTTTGTTGAATCCTATATTTTTAAAAATGCTCCTTATAAACTAAAAAGATATTTATGTCCTGTTCTTCTT
TATAATAAAAGGATTTTAATAATGCCTAGAGCAGAAGTCTTCCCTAACATAAGAAGAAAAACTTTTGTTGATTTAAAAAA
ATTGCGTGAAGAAAATTCTATAGAAGAAGATATTTATACCCTTGGAGAAAAATATTTTCTATTTAAAGAAGATTTATATG
TTCACAGTTCTTGGGGAATTATAAATGATACCTATTATTTAATAGATTATGGTTGCACTTCTTGTGAAGGAGACTTATAT
TACGACCTTCTCATGAGAACAAATGGACTTTTATAA

Upstream 100 bases:

>100_bases
GTAATTTATGTTTATTATCTAAATAATATATTACTTCAATCAACTTTTATTAAAGTTCCTTCATAGAATATAGAATAAAA
AGCTTTGAGGTTTTTTTATT

Downstream 100 bases:

>100_bases
AATAATCTTTATTAATTAATTGTTTTATAAATTTTACTGCATTATAATAATGGTAAGAATTTGTAAAGAAAGGACTGATA
TTATGAACAAATTTGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDIDDINILMKYLSNLPMKEYKKNFTFLGEGIARKVFALNKNLVVKVAKGEDGLHQNFVESYIFKNAPYKLKRYLCPVLL
YNKRILIMPRAEVFPNIRRKTFVDLKKLREENSIEEDIYTLGEKYFLFKEDLYVHSSWGIINDTYYLIDYGCTSCEGDLY
YDLLMRTNGLL

Sequences:

>Translated_171_residues
MDIDDINILMKYLSNLPMKEYKKNFTFLGEGIARKVFALNKNLVVKVAKGEDGLHQNFVESYIFKNAPYKLKRYLCPVLL
YNKRILIMPRAEVFPNIRRKTFVDLKKLREENSIEEDIYTLGEKYFLFKEDLYVHSSWGIINDTYYLIDYGCTSCEGDLY
YDLLMRTNGLL
>Mature_171_residues
MDIDDINILMKYLSNLPMKEYKKNFTFLGEGIARKVFALNKNLVVKVAKGEDGLHQNFVESYIFKNAPYKLKRYLCPVLL
YNKRILIMPRAEVFPNIRRKTFVDLKKLREENSIEEDIYTLGEKYFLFKEDLYVHSSWGIINDTYYLIDYGCTSCEGDLY
YDLLMRTNGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20244; Mature: 20244

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDDINILMKYLSNLPMKEYKKNFTFLGEGIARKVFALNKNLVVKVAKGEDGLHQNFVE
CCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
SYIFKNAPYKLKRYLCPVLLYNKRILIMPRAEVFPNIRRKTFVDLKKLREENSIEEDIYT
HHHHCCCCHHHHHHHHHHHHHCCEEEEEECHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
LGEKYFLFKEDLYVHSSWGIINDTYYLIDYGCTSCEGDLYYDLLMRTNGLL
HCCCEEEEECCEEEECCCCEECCEEEEEECCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIDDINILMKYLSNLPMKEYKKNFTFLGEGIARKVFALNKNLVVKVAKGEDGLHQNFVE
CCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
SYIFKNAPYKLKRYLCPVLLYNKRILIMPRAEVFPNIRRKTFVDLKKLREENSIEEDIYT
HHHHCCCCHHHHHHHHHHHHHCCEEEEEECHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
LGEKYFLFKEDLYVHSSWGIINDTYYLIDYGCTSCEGDLYYDLLMRTNGLL
HCCCEEEEECCEEEECCCCEECCEEEEEECCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA