| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is asnA [H]
Identifier: 18310960
GI number: 18310960
Start: 2265621
End: 2266631
Strand: Direct
Name: asnA [H]
Synonym: CPE1978
Alternate gene names: 18310960
Gene position: 2265621-2266631 (Clockwise)
Preceding gene: 18310958
Following gene: 18310961
Centisome position: 74.74
GC content: 30.76
Gene sequence:
>1011_bases ATGGAAAAATTATTTATACCAAAGGGCTATAAACCTTTATTATCACTTAGAGAAACTGAAGTTGCTATTAAAGAACTTAA AGACTTTTTCGAAGATTCTTTAGCTAAAAACTTAAACTTAACAAGAGTTTCTGCTCCACTTTTCGTAAATAAAGGTTCAG GATTAAATGATGATCTAAATGGAATTGAAAGACCTGTAAGTTTTGATATGAAAGCTATGCCAGAGTTTAACATTCAAATA GTTCATTCTCTAGCTAAATGGAAAAGACTAGCTCTTCATAGATATGAATTTGAACATGGTGAAGGTCTTTACACTGATAT GAACGCTATAAGAAGAGATGAAGATTTAGATAACATTCACTCTATTTATGTTGACCAATGGGATTGGGAGAAAATAATAG ATAAAGAAGAAAGAAATTTAGAAACTTTAAAAGAAACTGTAAAATCAATATATGGTACTTTTAAAGCAACAGAAGATTTT ATAGTAGCAAAATACCCTCACATAGAAAAAATTCTTCCTGAAGATATAACATTTATAACATCACAGGAATTAGAAGATCG TTATCCAGATCTTACTTCTAAAGAGAGAGAAACTGCTATATGTAAAGAATTTGGCGCTGTATTCATAATAGGAATTGGTG GAAAATTAGCTTCTGGTGAAAAACATGATGATAGAAGTCCAGACTATGATGATTGGACATTAAATGGAGATTTATTATTC TACTACCCTCTATTTGATGAGGCTGTAGAACTTTCATCAATGGGAATAAGAGTTGATGAGGAAAGCCTTTTAAAACAATT AAAAATAGCAGAATGTGAAGAAAGAAAAGAACTACCATTCCATCAAATGCTTCTTGAAGGAAAATTACCGTATACTATAG GTGGTGGAATTGGTCAATCTAGAATATGTATGTTCTTCCTTAGAAAAGCTCACATTGGAGAAGTTCAAGCATCTATGTGG GATGAAGATATGATAAGAACTTGTGAAGAAAACAACATACATTTATTATAA
Upstream 100 bases:
>100_bases TTAAAGAAATTTTAATAACCTGTTTGGGGCCAAACAAATTTATAAAAAAATATATGTAGCAAAAAATATATCTACATTTA AAATTAAGGAGTTGTTTAAA
Downstream 100 bases:
>100_bases AAGTTATATTAAAATTTTGATTTTTATTTAATTTAACTTTAACTTTAAAAAATTCAATATTATCCCTCTTATAAATATAG TATAATTTCTTTAATAAACT
Product: asparagine synthetase AsnA
Products: NA
Alternate protein names: Asparagine synthetase A [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MEKLFIPKGYKPLLSLRETEVAIKELKDFFEDSLAKNLNLTRVSAPLFVNKGSGLNDDLNGIERPVSFDMKAMPEFNIQI VHSLAKWKRLALHRYEFEHGEGLYTDMNAIRRDEDLDNIHSIYVDQWDWEKIIDKEERNLETLKETVKSIYGTFKATEDF IVAKYPHIEKILPEDITFITSQELEDRYPDLTSKERETAICKEFGAVFIIGIGGKLASGEKHDDRSPDYDDWTLNGDLLF YYPLFDEAVELSSMGIRVDEESLLKQLKIAECEERKELPFHQMLLEGKLPYTIGGGIGQSRICMFFLRKAHIGEVQASMW DEDMIRTCEENNIHLL
Sequences:
>Translated_336_residues MEKLFIPKGYKPLLSLRETEVAIKELKDFFEDSLAKNLNLTRVSAPLFVNKGSGLNDDLNGIERPVSFDMKAMPEFNIQI VHSLAKWKRLALHRYEFEHGEGLYTDMNAIRRDEDLDNIHSIYVDQWDWEKIIDKEERNLETLKETVKSIYGTFKATEDF IVAKYPHIEKILPEDITFITSQELEDRYPDLTSKERETAICKEFGAVFIIGIGGKLASGEKHDDRSPDYDDWTLNGDLLF YYPLFDEAVELSSMGIRVDEESLLKQLKIAECEERKELPFHQMLLEGKLPYTIGGGIGQSRICMFFLRKAHIGEVQASMW DEDMIRTCEENNIHLL >Mature_336_residues MEKLFIPKGYKPLLSLRETEVAIKELKDFFEDSLAKNLNLTRVSAPLFVNKGSGLNDDLNGIERPVSFDMKAMPEFNIQI VHSLAKWKRLALHRYEFEHGEGLYTDMNAIRRDEDLDNIHSIYVDQWDWEKIIDKEERNLETLKETVKSIYGTFKATEDF IVAKYPHIEKILPEDITFITSQELEDRYPDLTSKERETAICKEFGAVFIIGIGGKLASGEKHDDRSPDYDDWTLNGDLLF YYPLFDEAVELSSMGIRVDEESLLKQLKIAECEERKELPFHQMLLEGKLPYTIGGGIGQSRICMFFLRKAHIGEVQASMW DEDMIRTCEENNIHLL
Specific function: Asparagine biosynthesis. [C]
COG id: COG2502
COG function: function code E; Asparagine synthetase A
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. AsnA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790183, Length=308, Percent_Identity=49.3506493506493, Blast_Score=310, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006195 - InterPro: IPR004618 [H]
Pfam domain/function: PF03590 AsnA [H]
EC number: =6.3.1.1 [H]
Molecular weight: Translated: 38955; Mature: 38955
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLFIPKGYKPLLSLRETEVAIKELKDFFEDSLAKNLNLTRVSAPLFVNKGSGLNDDLN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCHH GIERPVSFDMKAMPEFNIQIVHSLAKWKRLALHRYEFEHGEGLYTDMNAIRRDEDLDNIH HHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHH SIYVDQWDWEKIIDKEERNLETLKETVKSIYGTFKATEDFIVAKYPHIEKILPEDITFIT HHHCCCCCHHHHHCHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCHHHHHH SQELEDRYPDLTSKERETAICKEFGAVFIIGIGGKLASGEKHDDRSPDYDDWTLNGDLLF HHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCCCCCEEECCCEEE YYPLFDEAVELSSMGIRVDEESLLKQLKIAECEERKELPFHQMLLEGKLPYTIGGGIGQS EECCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCHH RICMFFLRKAHIGEVQASMWDEDMIRTCEENNIHLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC >Mature Secondary Structure MEKLFIPKGYKPLLSLRETEVAIKELKDFFEDSLAKNLNLTRVSAPLFVNKGSGLNDDLN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCHH GIERPVSFDMKAMPEFNIQIVHSLAKWKRLALHRYEFEHGEGLYTDMNAIRRDEDLDNIH HHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHH SIYVDQWDWEKIIDKEERNLETLKETVKSIYGTFKATEDFIVAKYPHIEKILPEDITFIT HHHCCCCCHHHHHCHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCHHHHHH SQELEDRYPDLTSKERETAICKEFGAVFIIGIGGKLASGEKHDDRSPDYDDWTLNGDLLF HHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCCCCCEEECCCEEE YYPLFDEAVELSSMGIRVDEESLLKQLKIAECEERKELPFHQMLLEGKLPYTIGGGIGQS EECCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCHH RICMFFLRKAHIGEVQASMWDEDMIRTCEENNIHLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA