| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310881
Identifier: 18310881
GI number: 18310881
Start: 2179345
End: 2179899
Strand: Reverse
Name: 18310881
Synonym: CPE1899
Alternate gene names: NA
Gene position: 2179899-2179345 (Counterclockwise)
Preceding gene: 18310883
Following gene: 18310880
Centisome position: 71.91
GC content: 21.62
Gene sequence:
>555_bases ATGTTTTTAGCTATTATAATTGTTTTATCTTTATGTTTAACTTATTTAATTCTAAGGGATAATAAAGAAAATAATAAAAA TAAATCAAAGATAAATAGGGGATGGAAGGTAACTCCATATTTAAGTTTAAGAATAAGTTCCTTTGAAAGTAGGATTGATC TAGAGAAGATGAGGTTAAGGGAATTGATAAAAAATACTATAAGGTTAATGGATGATAAAGTTACTTTTATAGATTGTAAT AGTGACGGCTTTTATATAAAAAGTAAAAATGAATTAATTTATATAGAATTTTTAGTAGGGGACCAAAATGTAGAAAAAAA TAAAGAAAGTGTTTCTTTAAAAAATAATGAGATGGCAAAGTTAGAATTATATAATACAATAAGAAGTACTATTAGGAAAT ATATATGGTTTTGGGAAGAGAATTTTATTAATCCACTAAAAAGTGAATTTAATATAAGATTTTCAAGTGGAAATATAATT ATGAAAATTAGTAAAGAAGATAAAATAATCTTTAATAAAGATGAGGAAAATAATACTTTAAAAAATGAATCTTAA
Upstream 100 bases:
>100_bases AAATGTGTTTTGTAAATATATTGAAAATTAGGATACATAATGTATTAATTATATTTTAAATAGATATAATATATAAATAA ACTTAGTAGGGGGAGTAAAG
Downstream 100 bases:
>100_bases GTTTAAAGAGAAATTAATTAGATTTTTAGGATAGGTGTAAAGGAAACTTTATATTTATCCTTTTTATGTGTAAAATTAAA GTAGAATAGTTAAAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MFLAIIIVLSLCLTYLILRDNKENNKNKSKINRGWKVTPYLSLRISSFESRIDLEKMRLRELIKNTIRLMDDKVTFIDCN SDGFYIKSKNELIYIEFLVGDQNVEKNKESVSLKNNEMAKLELYNTIRSTIRKYIWFWEENFINPLKSEFNIRFSSGNII MKISKEDKIIFNKDEENNTLKNES
Sequences:
>Translated_184_residues MFLAIIIVLSLCLTYLILRDNKENNKNKSKINRGWKVTPYLSLRISSFESRIDLEKMRLRELIKNTIRLMDDKVTFIDCN SDGFYIKSKNELIYIEFLVGDQNVEKNKESVSLKNNEMAKLELYNTIRSTIRKYIWFWEENFINPLKSEFNIRFSSGNII MKISKEDKIIFNKDEENNTLKNES >Mature_184_residues MFLAIIIVLSLCLTYLILRDNKENNKNKSKINRGWKVTPYLSLRISSFESRIDLEKMRLRELIKNTIRLMDDKVTFIDCN SDGFYIKSKNELIYIEFLVGDQNVEKNKESVSLKNNEMAKLELYNTIRSTIRKYIWFWEENFINPLKSEFNIRFSSGNII MKISKEDKIIFNKDEENNTLKNES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21912; Mature: 21912
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLAIIIVLSLCLTYLILRDNKENNKNKSKINRGWKVTPYLSLRISSFESRIDLEKMRLR CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEECEEEEEEEECHHHHCCHHHHHHH ELIKNTIRLMDDKVTFIDCNSDGFYIKSKNELIYIEFLVGDQNVEKNKESVSLKNNEMAK HHHHHHHHHHCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCEEH LELYNTIRSTIRKYIWFWEENFINPLKSEFNIRFSSGNIIMKISKEDKIIFNKDEENNTL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCC KNES CCCC >Mature Secondary Structure MFLAIIIVLSLCLTYLILRDNKENNKNKSKINRGWKVTPYLSLRISSFESRIDLEKMRLR CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEECEEEEEEEECHHHHCCHHHHHHH ELIKNTIRLMDDKVTFIDCNSDGFYIKSKNELIYIEFLVGDQNVEKNKESVSLKNNEMAK HHHHHHHHHHCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCEEH LELYNTIRSTIRKYIWFWEENFINPLKSEFNIRFSSGNIIMKISKEDKIIFNKDEENNTL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCC KNES CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA