| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310846
Identifier: 18310846
GI number: 18310846
Start: 2134886
End: 2135314
Strand: Reverse
Name: 18310846
Synonym: CPE1864
Alternate gene names: NA
Gene position: 2135314-2134886 (Counterclockwise)
Preceding gene: 18310847
Following gene: 18310845
Centisome position: 70.44
GC content: 27.51
Gene sequence:
>429_bases ATGATTGTAAAAGAGTTTGATTATAATGGTAGTTCAGCGCTTAAACCACAGAGAAAAGAACAAACTATACCAAGTAAAGA AACCTATGACAAGAAAAAGAAAAAAATCGAACAACAAAGAAGAAAAAAGCAAAAAGATAAAAAAATAAAAAAAAGTGTAT ATCAAATAGTACTTCTAATATTAGTTGTTGGTGGGATAACAATAAGTAGAGATGTAAAAGTTTATAAAACTCAGCAACAA TTGGACTCATTAAATAAAGAAATAAATTCTGTTATAACGGAAAATGAAGCTTTGAAGGTTCAAATATTAAAGGCAAGTTC TTTAGACAAAATAGAGGAAACTGCTAAAAATAAATTAAAAATGATATTACCAACTAAGGAAAATATGATTAAGTTAGGCG AAAGCCAAGCTACTGAAGGTAAGCAATAG
Upstream 100 bases:
>100_bases CTAAGTTAAGAATAATAGAAAAATTATAAGATGATATATTTAGATAGCTTTATTAGATTTTTAAGTAAGGGGAATAAAAA TAATTGGAGAGGGATTGTAG
Downstream 100 bases:
>100_bases GGGAATAAATTAGGATGTACTTTTATTATTATTTTAAGAGTACATCCATAATTTTTTATAAGGGCTACAATTTTATAAAT TTAATTTTAATTAGATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MIVKEFDYNGSSALKPQRKEQTIPSKETYDKKKKKIEQQRRKKQKDKKIKKSVYQIVLLILVVGGITISRDVKVYKTQQQ LDSLNKEINSVITENEALKVQILKASSLDKIEETAKNKLKMILPTKENMIKLGESQATEGKQ
Sequences:
>Translated_142_residues MIVKEFDYNGSSALKPQRKEQTIPSKETYDKKKKKIEQQRRKKQKDKKIKKSVYQIVLLILVVGGITISRDVKVYKTQQQ LDSLNKEINSVITENEALKVQILKASSLDKIEETAKNKLKMILPTKENMIKLGESQATEGKQ >Mature_142_residues MIVKEFDYNGSSALKPQRKEQTIPSKETYDKKKKKIEQQRRKKQKDKKIKKSVYQIVLLILVVGGITISRDVKVYKTQQQ LDSLNKEINSVITENEALKVQILKASSLDKIEETAKNKLKMILPTKENMIKLGESQATEGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16333; Mature: 16333
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKEFDYNGSSALKPQRKEQTIPSKETYDKKKKKIEQQRRKKQKDKKIKKSVYQIVLLI CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVGGITISRDVKVYKTQQQLDSLNKEINSVITENEALKVQILKASSLDKIEETAKNKLK HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHEE MILPTKENMIKLGESQATEGKQ EECCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIVKEFDYNGSSALKPQRKEQTIPSKETYDKKKKKIEQQRRKKQKDKKIKKSVYQIVLLI CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVGGITISRDVKVYKTQQQLDSLNKEINSVITENEALKVQILKASSLDKIEETAKNKLK HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHEE MILPTKENMIKLGESQATEGKQ EECCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA