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The map label for this gene is tapB [H]

Identifier: 18310826

GI number: 18310826

Start: 2113997

End: 2115385

Strand: Reverse

Name: tapB [H]

Synonym: CPE1844

Alternate gene names: 18310826

Gene position: 2115385-2113997 (Counterclockwise)

Preceding gene: 18310827

Following gene: 18310825

Centisome position: 69.78

GC content: 27.07

Gene sequence:

>1389_bases
ATGAAATATACCATTAAAGATATAGATATGAAGCTAATGGAGAATATATCTAAGAATACAGCTTTAGAGATGAATTTAAT
TGCCTTAAAAGAAAGTTCAGGTAAGATATTTTTTTATACAAGTAAGGAAGAATCAAAGAAAAGGGAGTATTTATCCTTAT
TATTTAGAGAAAAAGAAATAAACTTTGTAATTGGAAATAAGGATGAAATAGAAATTTTAATTGAAGATTGTTATGGTGGA
AAAAGTTTTTCTAAGGATAAATTTATTGAGGAAGAATTAATAAGTCTTATATCTTTAGGTATAGAAAAAAATACTAGTGA
TATTCATATTGAACCCTTAGAAGAATATGCTAACATTCGCTTTAGAATAGATGGAACTTTAGTTTTAGTTAAGAGAATAA
AGAAAAATCTTTATGAAAATTTAGTCAATAAGATAAAGTTAAAAGCTGATATGGATATAAGTGATAAATTAAGATGCCAA
GATGGGAAGGTATCATTTAAAAATTATGGATATGATTGTGACTTAAGAATATCAAGTATTCCAAGTACTTTTGGTGAAAA
ATTAGTAGTTAGAATTTTATATAAGAAAAATGAGTTTATGAATACTGATAATTTGAGTTTAATGGAAGATCAAAAGAATA
AAATAAATAAACTTTTAAAATTAAAACATGGAATGGTAGTTATAAATGGTCCTACAGGAAGCGGAAAATCAACAACTCTA
TATGCATTATTAAATTCAATAGATAAGGAAGGGATAAATATAAGTACCATAGAAGATCCTGTTGAGTTTACCATAGAAGG
AATAACTCAGACAAATGTTAATGAGAAGGTTGGATTAACCTTTGCTAATGGATTAAAACATATATTAAGACAGGACCCTG
ATGTTATATTAATTGGAGAAATAAGAGATGAGGAAACGGCTAAAATTGCCATAAGAGCTTCCATAACAGGGCATAAAGTA
TATTCAACAATACACGCTAACAGTGGTAATGAAGTTTTTAACAGATTATTAGATATGGGAGTAGAAGGATATTTAGTAAA
GGAAGGAGTAAGTTCAATAATAACTCAAAGATTAGTAAGAAAAATTTGTGAAAAGTGTAAAGTGAAAATAGAGCTTAAAA
ATGAACTAGTTGAGAATTTAAAAGAGGAAGAGTTAAGTTTAAAAGATTACTATAAAGGAACTGGATGTGAAATGTGTAAT
TGGACAGGTAATAATGGAAGAAAAGCAATTTGTGAAATTATATTTCCAAGAGAATATAAAAGCACAGAGGATATTACTTG
GGGAGAAGAACTATTAAAGGCATGTTTTACCTTAGTTAAAAAGGGAGAAATATCTTTACAAGAATATTATTTATTAAAAG
AATGTGAGGGGTTAGATGTTTGGGTTTAA

Upstream 100 bases:

>100_bases
GTTAAAAGTTCTAGATTATTAAAAATTTTTAATAATCTAGAATTTTTTTTGTTTAAAAAAGAAATGCCTTGTCAATTATT
ACTGATGAGGAGGTTGATAT

Downstream 100 bases:

>100_bases
AGATGAAGCTTCATACATATGCTTAAATTTAAGCACATATGTAAAATCAGGAATGTCTATAGGACGATCATTAGACTTAA
TAAAGAACACTGTAAAAGAT

Product: type IV pilus assembly protein

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKYTIKDIDMKLMENISKNTALEMNLIALKESSGKIFFYTSKEESKKREYLSLLFREKEINFVIGNKDEIEILIEDCYGG
KSFSKDKFIEEELISLISLGIEKNTSDIHIEPLEEYANIRFRIDGTLVLVKRIKKNLYENLVNKIKLKADMDISDKLRCQ
DGKVSFKNYGYDCDLRISSIPSTFGEKLVVRILYKKNEFMNTDNLSLMEDQKNKINKLLKLKHGMVVINGPTGSGKSTTL
YALLNSIDKEGINISTIEDPVEFTIEGITQTNVNEKVGLTFANGLKHILRQDPDVILIGEIRDEETAKIAIRASITGHKV
YSTIHANSGNEVFNRLLDMGVEGYLVKEGVSSIITQRLVRKICEKCKVKIELKNELVENLKEEELSLKDYYKGTGCEMCN
WTGNNGRKAICEIIFPREYKSTEDITWGEELLKACFTLVKKGEISLQEYYLLKECEGLDVWV

Sequences:

>Translated_462_residues
MKYTIKDIDMKLMENISKNTALEMNLIALKESSGKIFFYTSKEESKKREYLSLLFREKEINFVIGNKDEIEILIEDCYGG
KSFSKDKFIEEELISLISLGIEKNTSDIHIEPLEEYANIRFRIDGTLVLVKRIKKNLYENLVNKIKLKADMDISDKLRCQ
DGKVSFKNYGYDCDLRISSIPSTFGEKLVVRILYKKNEFMNTDNLSLMEDQKNKINKLLKLKHGMVVINGPTGSGKSTTL
YALLNSIDKEGINISTIEDPVEFTIEGITQTNVNEKVGLTFANGLKHILRQDPDVILIGEIRDEETAKIAIRASITGHKV
YSTIHANSGNEVFNRLLDMGVEGYLVKEGVSSIITQRLVRKICEKCKVKIELKNELVENLKEEELSLKDYYKGTGCEMCN
WTGNNGRKAICEIIFPREYKSTEDITWGEELLKACFTLVKKGEISLQEYYLLKECEGLDVWV
>Mature_462_residues
MKYTIKDIDMKLMENISKNTALEMNLIALKESSGKIFFYTSKEESKKREYLSLLFREKEINFVIGNKDEIEILIEDCYGG
KSFSKDKFIEEELISLISLGIEKNTSDIHIEPLEEYANIRFRIDGTLVLVKRIKKNLYENLVNKIKLKADMDISDKLRCQ
DGKVSFKNYGYDCDLRISSIPSTFGEKLVVRILYKKNEFMNTDNLSLMEDQKNKINKLLKLKHGMVVINGPTGSGKSTTL
YALLNSIDKEGINISTIEDPVEFTIEGITQTNVNEKVGLTFANGLKHILRQDPDVILIGEIRDEETAKIAIRASITGHKV
YSTIHANSGNEVFNRLLDMGVEGYLVKEGVSSIITQRLVRKICEKCKVKIELKNELVENLKEEELSLKDYYKGTGCEMCN
WTGNNGRKAICEIIFPREYKSTEDITWGEELLKACFTLVKKGEISLQEYYLLKECEGLDVWV

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=320, Percent_Identity=43.75, Blast_Score=304, Evalue=8e-84,
Organism=Escherichia coli, GI1786296, Length=324, Percent_Identity=37.6543209876543, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI87082188, Length=248, Percent_Identity=31.0483870967742, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 52858; Mature: 52858

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTIKDIDMKLMENISKNTALEMNLIALKESSGKIFFYTSKEESKKREYLSLLFREKEI
CCEEHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCC
NFVIGNKDEIEILIEDCYGGKSFSKDKFIEEELISLISLGIEKNTSDIHIEPLEEYANIR
EEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCEE
FRIDGTLVLVKRIKKNLYENLVNKIKLKADMDISDKLRCQDGKVSFKNYGYDCDLRISSI
EEECCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCCCEECCCCCCEEEEEECCC
PSTFGEKLVVRILYKKNEFMNTDNLSLMEDQKNKINKLLKLKHGMVVINGPTGSGKSTTL
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH
YALLNSIDKEGINISTIEDPVEFTIEGITQTNVNEKVGLTFANGLKHILRQDPDVILIGE
HHHHHHHHHCCCEEEECCCCCEEEEECCEECCCCCEECEEHHHHHHHHHHCCCCEEEEEC
IRDEETAKIAIRASITGHKVYSTIHANSGNEVFNRLLDMGVEGYLVKEGVSSIITQRLVR
CCCCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
KICEKCKVKIELKNELVENLKEEELSLKDYYKGTGCEMCNWTGNNGRKAICEIIFPREYK
HHHHHCEEEEEEHHHHHHHHHHHHCCHHHHCCCCCCCEEECCCCCCCEEEEEEECCCCCC
STEDITWGEELLKACFTLVKKGEISLQEYYLLKECEGLDVWV
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKYTIKDIDMKLMENISKNTALEMNLIALKESSGKIFFYTSKEESKKREYLSLLFREKEI
CCEEHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCC
NFVIGNKDEIEILIEDCYGGKSFSKDKFIEEELISLISLGIEKNTSDIHIEPLEEYANIR
EEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCEE
FRIDGTLVLVKRIKKNLYENLVNKIKLKADMDISDKLRCQDGKVSFKNYGYDCDLRISSI
EEECCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCCCEECCCCCCEEEEEECCC
PSTFGEKLVVRILYKKNEFMNTDNLSLMEDQKNKINKLLKLKHGMVVINGPTGSGKSTTL
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH
YALLNSIDKEGINISTIEDPVEFTIEGITQTNVNEKVGLTFANGLKHILRQDPDVILIGE
HHHHHHHHHCCCEEEECCCCCEEEEECCEECCCCCEECEEHHHHHHHHHHCCCCEEEEEC
IRDEETAKIAIRASITGHKVYSTIHANSGNEVFNRLLDMGVEGYLVKEGVSSIITQRLVR
CCCCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
KICEKCKVKIELKNELVENLKEEELSLKDYYKGTGCEMCNWTGNNGRKAICEIIFPREYK
HHHHHCEEEEEEHHHHHHHHHHHHCCHHHHCCCCCCCEEECCCCCCCEEEEEEECCCCCC
STEDITWGEELLKACFTLVKKGEISLQEYYLLKECEGLDVWV
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]