| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310822
Identifier: 18310822
GI number: 18310822
Start: 2111613
End: 2111903
Strand: Reverse
Name: 18310822
Synonym: CPE1840
Alternate gene names: NA
Gene position: 2111903-2111613 (Counterclockwise)
Preceding gene: 18310823
Following gene: 18310821
Centisome position: 69.67
GC content: 23.71
Gene sequence:
>291_bases ATGTATTTAAATCACAGGTTTTGGGATAATATGGTTGAAGATATAAAGATAAATAAAGATGAAGACTATATTGTAGTTAA GTTTTGGAGAAAGGGTATTGTAGAAGAAAATAAAATAGAAAAGAAAGAAGATAAATTACATGTTTATTATATAAGTAGCG GAGAAAATCGTAATCATATATTAATAGAAAATGTTGAAGAATTTGATGTGGTAGAAAAGAAGAACTTATTTTATATAAAA TTAAAGGTTAAAAATCAAGAAGAAAGGATTTATTGTTATGAAAAGGCGTAA
Upstream 100 bases:
>100_bases TATAACCTTAAGTTTAACAAAGAATTTGATTTTTTATGTTAAAGAGTATAAGAGGTTTATTCCAAAAGAGAAAGAATTAA ACTACTTGTTGGATGCAGAA
Downstream 100 bases:
>100_bases GGGTTTTGTTTCTATAGAAGTTATGTTAGTTTCACTAATTTGCAGCATGATAGTTACTATACTTATGGATAATTCATTTC AAAGGAGAAAGGAACTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MYLNHRFWDNMVEDIKINKDEDYIVVKFWRKGIVEENKIEKKEDKLHVYYISSGENRNHILIENVEEFDVVEKKNLFYIK LKVKNQEERIYCYEKA
Sequences:
>Translated_96_residues MYLNHRFWDNMVEDIKINKDEDYIVVKFWRKGIVEENKIEKKEDKLHVYYISSGENRNHILIENVEEFDVVEKKNLFYIK LKVKNQEERIYCYEKA >Mature_96_residues MYLNHRFWDNMVEDIKINKDEDYIVVKFWRKGIVEENKIEKKEDKLHVYYISSGENRNHILIENVEEFDVVEKKNLFYIK LKVKNQEERIYCYEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11920; Mature: 11920
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNHRFWDNMVEDIKINKDEDYIVVKFWRKGIVEENKIEKKEDKLHVYYISSGENRNHI CCCCCHHHCCCHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEE LIENVEEFDVVEKKNLFYIKLKVKNQEERIYCYEKA EEECCCCCCCEECCCEEEEEEEEECCCCEEEEEECC >Mature Secondary Structure MYLNHRFWDNMVEDIKINKDEDYIVVKFWRKGIVEENKIEKKEDKLHVYYISSGENRNHI CCCCCHHHCCCHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEE LIENVEEFDVVEKKNLFYIKLKVKNQEERIYCYEKA EEECCCCCCCEECCCEEEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA