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The map label for this gene is scpB

Identifier: 18310786

GI number: 18310786

Start: 2083564

End: 2084151

Strand: Reverse

Name: scpB

Synonym: CPE1804

Alternate gene names: 18310786

Gene position: 2084151-2083564 (Counterclockwise)

Preceding gene: 18310787

Following gene: 18310783

Centisome position: 68.75

GC content: 28.4

Gene sequence:

>588_bases
ATGAGTGATATAAATCAAATAGAATTTAGTGAAATATCTAAAAAAGACGAGCTTAAGTCTATTATAGAATCTCTTTTATT
TGTTAGTGGAGAACCTCTTGCTTTAAAGGATATATGTAGAATAGTAGAAGAGGATTTTAAATATGTAGAAGATTTAATGA
GAGAATTAATGAATATATATAATGGAGATAGTTCAAGAGGGATAAAAATTATTAGTTTAAATGGAACTTATCAGTTAGTT
ACTAAAACAAAAAATAGTGAATATGTTCAAAAGCTTTTAAAAAAGAATGTTAGACAATCCTTATCTCAGGCTTCTTTAGA
AAGTTTAGCAATAATATGTTATAAGCAACCTATTACTAGAGTTGAGATAGATGAGATAAGAGGAGTAAAAAGCGAAAGTG
CTATACAAAGACTTGTTGAAAAAAATTTAGTTGAGGAAACTGGAAGATTAGAGGTTCCAGGAAGACCTATACTTTATGGA
ACTACAGATGAATTTTTAAGACATTTTGCATTAAATGATTTAGGAGATCTTCCATCTATAGAGTTATTTGAAGAAAATGA
TGAGGTTTCTGACATGGTGGAAGAGTAG

Upstream 100 bases:

>100_bases
GTTACTTTTATGGCAATGCTTGAACTTATAAAAAGAAGTGAAATTAAAGTTGTCCAATATGAAAACTTTGGTGAGATTAT
GATGGAAAAGGTGATAGTAA

Downstream 100 bases:

>100_bases
ATGATTCTAAATTTATAAAAAGTAAAATAGTATAACTTAAGGAATTTAGTATAATAATTTGTTTATATAAATTAAGAAGG
TAGAGAATATTAATTATTCT

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSDINQIEFSEISKKDELKSIIESLLFVSGEPLALKDICRIVEEDFKYVEDLMRELMNIYNGDSSRGIKIISLNGTYQLV
TKTKNSEYVQKLLKKNVRQSLSQASLESLAIICYKQPITRVEIDEIRGVKSESAIQRLVEKNLVEETGRLEVPGRPILYG
TTDEFLRHFALNDLGDLPSIELFEENDEVSDMVEE

Sequences:

>Translated_195_residues
MSDINQIEFSEISKKDELKSIIESLLFVSGEPLALKDICRIVEEDFKYVEDLMRELMNIYNGDSSRGIKIISLNGTYQLV
TKTKNSEYVQKLLKKNVRQSLSQASLESLAIICYKQPITRVEIDEIRGVKSESAIQRLVEKNLVEETGRLEVPGRPILYG
TTDEFLRHFALNDLGDLPSIELFEENDEVSDMVEE
>Mature_194_residues
SDINQIEFSEISKKDELKSIIESLLFVSGEPLALKDICRIVEEDFKYVEDLMRELMNIYNGDSSRGIKIISLNGTYQLVT
KTKNSEYVQKLLKKNVRQSLSQASLESLAIICYKQPITRVEIDEIRGVKSESAIQRLVEKNLVEETGRLEVPGRPILYGT
TDEFLRHFALNDLGDLPSIELFEENDEVSDMVEE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPB_CLOP1 (Q0TPF2)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696488.1
- ProteinModelPortal:   Q0TPF2
- SMR:   Q0TPF2
- STRING:   Q0TPF2
- GeneID:   4201482
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_2059
- TIGR:   CPF_2059
- eggNOG:   COG1386
- HOGENOM:   HBG752450
- OMA:   REWIRIA
- ProtClustDB:   PRK00135
- BioCyc:   CPER195103:CPF_2059-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01804
- InterPro:   IPR005234
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PIRSF:   PIRSF019345
- TIGRFAMs:   TIGR00281

Pfam domain/function: PF04079 DUF387

EC number: NA

Molecular weight: Translated: 22309; Mature: 22178

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDINQIEFSEISKKDELKSIIESLLFVSGEPLALKDICRIVEEDFKYVEDLMRELMNIY
CCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NGDSSRGIKIISLNGTYQLVTKTKNSEYVQKLLKKNVRQSLSQASLESLAIICYKQPITR
CCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VEIDEIRGVKSESAIQRLVEKNLVEETGRLEVPGRPILYGTTDEFLRHFALNDLGDLPSI
EEHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCEEECCHHHHHHHHHHHHCCCCCCE
ELFEENDEVSDMVEE
EEECCCCHHHHHHCC
>Mature Secondary Structure 
SDINQIEFSEISKKDELKSIIESLLFVSGEPLALKDICRIVEEDFKYVEDLMRELMNIY
CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NGDSSRGIKIISLNGTYQLVTKTKNSEYVQKLLKKNVRQSLSQASLESLAIICYKQPITR
CCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VEIDEIRGVKSESAIQRLVEKNLVEETGRLEVPGRPILYGTTDEFLRHFALNDLGDLPSI
EEHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCEEECCHHHHHHHHHHHHCCCCCCE
ELFEENDEVSDMVEE
EEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA