| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is fur [H]
Identifier: 18310758
GI number: 18310758
Start: 2056051
End: 2056503
Strand: Reverse
Name: fur [H]
Synonym: CPE1776
Alternate gene names: 18310758
Gene position: 2056503-2056051 (Counterclockwise)
Preceding gene: 18310759
Following gene: 18310757
Centisome position: 67.84
GC content: 32.45
Gene sequence:
>453_bases ATGGCAAATACAGCTTCAGTAGATTTTGATGCTTTAAAAGAAGAATTAAAGAAGAAGGGTTATAAGTTAACACCTCAGAG AAGAGCTATAGTTGATACTATAATACAAAATGAGGGTAAACACTTAACTGCTGAGGAAATTTATGACGAGGTTAAGAAAA GTTGTCCAGAGATTGGATTAGCTACCGTATATAGAACAATAATTCTTCTAGAAGAGATGGGTGTAATCTATAAGTTAGAT TTAGAAGATGGATGCAGTAGATATGAACTTGCTCATGACGATGAAGAGCATAGACACCATCATCTAGTTTGTAATAAATG TGGAAAAGTTTTTGAGGTTGAAGCGGATTTATTAGACGAACTAGAAGAAGAGATTGAAACTAAATATGGCTTTGAAATAT TAGATCATACAGTAAAGTTTTTCGGAATATGCAAGGATTGTAAAAATGAATAG
Upstream 100 bases:
>100_bases CTTTAGCTCCAGTTGAGAATGATTTTGAAATTGAAATGATAGAAGAAGCTTATGCAACTTTATTCGCAGAAGAAGAATAA CGGTAAAGTGAGGTTTTAAT
Downstream 100 bases:
>100_bases AGAAATTTTCTCAAATGAGGAAACCTCTTTTATACATAAGCGTACTACTACAAAAAAGAGGAGGGAAAATATGAAACGTG AAAAGCTAAAGGTTAAAATT
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MANTASVDFDALKEELKKKGYKLTPQRRAIVDTIIQNEGKHLTAEEIYDEVKKSCPEIGLATVYRTIILLEEMGVIYKLD LEDGCSRYELAHDDEEHRHHHLVCNKCGKVFEVEADLLDELEEEIETKYGFEILDHTVKFFGICKDCKNE
Sequences:
>Translated_150_residues MANTASVDFDALKEELKKKGYKLTPQRRAIVDTIIQNEGKHLTAEEIYDEVKKSCPEIGLATVYRTIILLEEMGVIYKLD LEDGCSRYELAHDDEEHRHHHLVCNKCGKVFEVEADLLDELEEEIETKYGFEILDHTVKFFGICKDCKNE >Mature_149_residues ANTASVDFDALKEELKKKGYKLTPQRRAIVDTIIQNEGKHLTAEEIYDEVKKSCPEIGLATVYRTIILLEEMGVIYKLDL EDGCSRYELAHDDEEHRHHHLVCNKCGKVFEVEADLLDELEEEIETKYGFEILDHTVKFFGICKDCKNE
Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=135, Percent_Identity=34.8148148148148, Blast_Score=91, Evalue=3e-20, Organism=Escherichia coli, GI87082363, Length=150, Percent_Identity=25.3333333333333, Blast_Score=60, Evalue=4e-11,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17336; Mature: 17205
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTASVDFDALKEELKKKGYKLTPQRRAIVDTIIQNEGKHLTAEEIYDEVKKSCPEIGL CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH ATVYRTIILLEEMGVIYKLDLEDGCSRYELAHDDEEHRHHHLVCNKCGKVFEVEADLLDE HHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHH LEEEIETKYGFEILDHTVKFFGICKDCKNE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANTASVDFDALKEELKKKGYKLTPQRRAIVDTIIQNEGKHLTAEEIYDEVKKSCPEIGL CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH ATVYRTIILLEEMGVIYKLDLEDGCSRYELAHDDEEHRHHHLVCNKCGKVFEVEADLLDE HHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHH LEEEIETKYGFEILDHTVKFFGICKDCKNE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9701813 [H]