Click here to switch to the map view.

The map label for this gene is yrrL [H]

Identifier: 18310755

GI number: 18310755

Start: 2051153

End: 2052181

Strand: Reverse

Name: yrrL [H]

Synonym: CPE1773

Alternate gene names: 18310755

Gene position: 2052181-2051153 (Counterclockwise)

Preceding gene: 18310756

Following gene: 18310754

Centisome position: 67.7

GC content: 30.42

Gene sequence:

>1029_bases
GTGAAAAGGCTAAAAAACTCTAAAAGTATGGTTTTGATATCCATATTCATAATTTTACTTGTGATTAACTTAGCTGTATT
TGTAGTTAAATATAACTCCATAAAGCGAAGCCCTTTACAATCTAATAAAGCTGATATAACCTTTAAAGTTAAAGAAGGAG
AGTCACTAAATGGACTTTTTGAACGATTAAACAATGAAAATGTACTTAGAAGTTCCTTTTTTTCTAAGATATATATAAAG
TTTAATAACGTAGAAGAAAGTATAAAACCAGGTACATATACTGTGAATAGTGACATAAGTTTTAATGATTTTTTAAGTGT
ACTAACTGATGGGAAAGTATCAGATTATAAGGTAACATTTCCAGAGGGATACACTGTAGAGGATATAGCTAAGAAATTGG
AAGAATCTAAGGTATGCACAAAAGATGAGTTTTTAAAAGTAGTAAAAGAGTATCCATTACCATCTTATATAAAACCTAAT
AATGAAAGAAAATATGAGTTAGAAGGATTTTTATTTCCAGACACATATGCTATTCCTAAAGGCACAACACCAAAACAAAT
AATTGAAATGATGCTTAACAGGTTTGAAGGGGTAATTAGTGAGATACAAAGTGAACTAGGCATTACTATTCCAAAGGAAG
AGTATGAGAAATATGTAATAGTAGCTTCAATGGTTGAAAAAGAGGCTAGGGATGATAGTGAGCGTGCAGAAATAGCATCT
GTTATATATAACAGACTACAAAAAGGTATGCCTTTACAAATCGATGCTACAGTTTTATATGCTTTAGGAGAGCATAAAGA
TACTGTACTTTATAAAGACTTAAAAGTGGATTCACCATATAATACATATAAGATTAAAGGACTTCCAGTGGGGCCAATAT
GTAATCCTGGAAAACCTTCGCTTTGGGCTGCCATAAAACCAGCTAAAACAGACTACATATATTATTTATTGAATCCATCA
AATAATAAGCACTATTTTACTAATAATTACGAAGATTTCCTAGCTAAGAAGAAAGAATTTGGATACTAA

Upstream 100 bases:

>100_bases
ACAAAAATTAGTAAAACAAGTTTGTTTTTATGAGAAAAAGATTTATAATTAGATAAATGGCTTTATGGCCATTTATCTTA
AAATATGAGGGGGTACTACT

Downstream 100 bases:

>100_bases
AATTTGGAGGAGCAAATGAGTGGAGTAACCTTTGAATATATGGAAAAGTATCTTAGAGATCTTATTCCAGATAGAAATGA
CGAATTAAAAGAACTAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKRLKNSKSMVLISIFIILLVINLAVFVVKYNSIKRSPLQSNKADITFKVKEGESLNGLFERLNNENVLRSSFFSKIYIK
FNNVEESIKPGTYTVNSDISFNDFLSVLTDGKVSDYKVTFPEGYTVEDIAKKLEESKVCTKDEFLKVVKEYPLPSYIKPN
NERKYELEGFLFPDTYAIPKGTTPKQIIEMMLNRFEGVISEIQSELGITIPKEEYEKYVIVASMVEKEARDDSERAEIAS
VIYNRLQKGMPLQIDATVLYALGEHKDTVLYKDLKVDSPYNTYKIKGLPVGPICNPGKPSLWAAIKPAKTDYIYYLLNPS
NNKHYFTNNYEDFLAKKKEFGY

Sequences:

>Translated_342_residues
MKRLKNSKSMVLISIFIILLVINLAVFVVKYNSIKRSPLQSNKADITFKVKEGESLNGLFERLNNENVLRSSFFSKIYIK
FNNVEESIKPGTYTVNSDISFNDFLSVLTDGKVSDYKVTFPEGYTVEDIAKKLEESKVCTKDEFLKVVKEYPLPSYIKPN
NERKYELEGFLFPDTYAIPKGTTPKQIIEMMLNRFEGVISEIQSELGITIPKEEYEKYVIVASMVEKEARDDSERAEIAS
VIYNRLQKGMPLQIDATVLYALGEHKDTVLYKDLKVDSPYNTYKIKGLPVGPICNPGKPSLWAAIKPAKTDYIYYLLNPS
NNKHYFTNNYEDFLAKKKEFGY
>Mature_342_residues
MKRLKNSKSMVLISIFIILLVINLAVFVVKYNSIKRSPLQSNKADITFKVKEGESLNGLFERLNNENVLRSSFFSKIYIK
FNNVEESIKPGTYTVNSDISFNDFLSVLTDGKVSDYKVTFPEGYTVEDIAKKLEESKVCTKDEFLKVVKEYPLPSYIKPN
NERKYELEGFLFPDTYAIPKGTTPKQIIEMMLNRFEGVISEIQSELGITIPKEEYEKYVIVASMVEKEARDDSERAEIAS
VIYNRLQKGMPLQIDATVLYALGEHKDTVLYKDLKVDSPYNTYKIKGLPVGPICNPGKPSLWAAIKPAKTDYIYYLLNPS
NNKHYFTNNYEDFLAKKKEFGY

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=294, Percent_Identity=29.5918367346939, Blast_Score=131, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 39255; Mature: 39255

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLKNSKSMVLISIFIILLVINLAVFVVKYNSIKRSPLQSNKADITFKVKEGESLNGLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH
ERLNNENVLRSSFFSKIYIKFNNVEESIKPGTYTVNSDISFNDFLSVLTDGKVSDYKVTF
HHHCCCHHHHHHHHEEEEEEECCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEC
PEGYTVEDIAKKLEESKVCTKDEFLKVVKEYPLPSYIKPNNERKYELEGFLFPDTYAIPK
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
GTTPKQIIEMMLNRFEGVISEIQSELGITIPKEEYEKYVIVASMVEKEARDDSERAEIAS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEHHHHHHHHHHCCCHHHHHHHH
VIYNRLQKGMPLQIDATVLYALGEHKDTVLYKDLKVDSPYNTYKIKGLPVGPICNPGKPS
HHHHHHHCCCCEEECCEEEEEECCCCCEEEEEEEECCCCCCEEEEECEECCCCCCCCCCC
LWAAIKPAKTDYIYYLLNPSNNKHYFTNNYEDFLAKKKEFGY
EEEEECCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLKNSKSMVLISIFIILLVINLAVFVVKYNSIKRSPLQSNKADITFKVKEGESLNGLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH
ERLNNENVLRSSFFSKIYIKFNNVEESIKPGTYTVNSDISFNDFLSVLTDGKVSDYKVTF
HHHCCCHHHHHHHHEEEEEEECCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEC
PEGYTVEDIAKKLEESKVCTKDEFLKVVKEYPLPSYIKPNNERKYELEGFLFPDTYAIPK
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
GTTPKQIIEMMLNRFEGVISEIQSELGITIPKEEYEKYVIVASMVEKEARDDSERAEIAS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEHHHHHHHHHHCCCHHHHHHHH
VIYNRLQKGMPLQIDATVLYALGEHKDTVLYKDLKVDSPYNTYKIKGLPVGPICNPGKPS
HHHHHHHCCCCEEECCEEEEEECCCCCEEEEEEEECCCCCCEEEEECEECCCCCCCCCCC
LWAAIKPAKTDYIYYLLNPSNNKHYFTNNYEDFLAKKKEFGY
EEEEECCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]