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The map label for this gene is yrrO [H]

Identifier: 18310753

GI number: 18310753

Start: 2049258

End: 2050487

Strand: Reverse

Name: yrrO [H]

Synonym: CPE1771

Alternate gene names: 18310753

Gene position: 2050487-2049258 (Counterclockwise)

Preceding gene: 18310754

Following gene: 18310752

Centisome position: 67.64

GC content: 32.03

Gene sequence:

>1230_bases
ATGAGAAAACCAGAAATATTAGCACCAGCAGGTAGCTTAGAAAAATTAAAGACAGCAATTGATTTTGGAGCAGATGCAGT
TTATATTGGAGGAAGTAAACTTAACCTAAGAGCTTTCGCTGATAACTTTACAAATGAACAGATTGCAGAAGGTGTAAAGT
ATGCTCATGATAGAGGAAGAAAAGTTTATGTTACTATGAATGTATTTCCTCACAATGCAGATTTAGAAGGATTAGAAGAA
TACATTGTAGGACTTAATGATTTAAATGTAGATGCAATAATAGTTTCAGATCCATCAATAATAATGACTGCAAAGGAAGT
TGCACCAGATTTAGAAATACACTTAAGTACTCAAGCAAACAATGTAAACTGGAAGTCAGCTAAGTTTTGGCATAGCTTAG
GAGTTAAGAGAATTGTTTTAGCTAGAGAGCTTAGTTTTAAAGAAATTGAAAAAATACATGAGAATTTACCAGAAGATTGT
GATTTAGAAGCATTTGTTCATGGTTCAATGTGTATGGCATACTCAGGAAGATGTTTAATATCAAACTACATGACAGGAAG
AGACTCAAATAGAGGAGCTTGTTCACAAGCATGTAGATATAAGTATTATTTAATGGAAGAAAAGAGACCTGGAGAGTATT
TCCAAGTTATAGAAGATGATAAAGGTACATACATAATGAACTCTAAGGATTTATGTATGATAGAATATATACCAGAGCTT
GTTAAGAGTGGTATATACTCATTTAAAATAGAAGGAAGAATGAAGAGCCCATACTATGTTGCTGCAATTGTTAAAGCTTA
CAGAGAAGCTTTAGATAAGTATTGGGATGATCCAGAAGGATATGAATTTGATCAAAAATTAATGGATAATCTTTTAAAGG
TTAGTCATAGAAGATATCACACAGGATTTTACTTTGGAAAATCAGGAGAGCAAGTTTATGAATCATCATCTTATATAAGA
GATTATGATATCGTAGGAGTTGTTAGAGATTATAACGAAGAAACTAAGGTAGCAACTATAGAACAAAGAAACAGATTATT
CGAAGGGGATACAGTAGAGGTATTAACTCCAGTAGGAGATTACTATGAAATCCAAATGAATGATATGAAGGATGAAAAAG
ACGAAAAAATAGATGTTGCTAACAAAGCTCAAATGATATTCAAGGTTAAAATAGATAAGCCTGTAAAGGTAAATGATATG
TTAATTAAGTGCAAGGAGGCAAACAGCTAA

Upstream 100 bases:

>100_bases
TGAGAAAGTATTTGGATATGGTCTCAAAGGATGAAAATTTAATAACAACTGTTATTCCTATGGGAGATGGAATTGCGTTA
ACTAAGAGGAGGTAGCAAAC

Downstream 100 bases:

>100_bases
TGAAGAGACCAATTTTTATAGGAATAACAGGAGGCACTGGCTCAGGTAAAAGTACAATAGCTAAGGAGATATATAGACAA
TTTGGTGAAGATTGTATAGC

Product: peptidase, U32 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRKPEILAPAGSLEKLKTAIDFGADAVYIGGSKLNLRAFADNFTNEQIAEGVKYAHDRGRKVYVTMNVFPHNADLEGLEE
YIVGLNDLNVDAIIVSDPSIIMTAKEVAPDLEIHLSTQANNVNWKSAKFWHSLGVKRIVLARELSFKEIEKIHENLPEDC
DLEAFVHGSMCMAYSGRCLISNYMTGRDSNRGACSQACRYKYYLMEEKRPGEYFQVIEDDKGTYIMNSKDLCMIEYIPEL
VKSGIYSFKIEGRMKSPYYVAAIVKAYREALDKYWDDPEGYEFDQKLMDNLLKVSHRRYHTGFYFGKSGEQVYESSSYIR
DYDIVGVVRDYNEETKVATIEQRNRLFEGDTVEVLTPVGDYYEIQMNDMKDEKDEKIDVANKAQMIFKVKIDKPVKVNDM
LIKCKEANS

Sequences:

>Translated_409_residues
MRKPEILAPAGSLEKLKTAIDFGADAVYIGGSKLNLRAFADNFTNEQIAEGVKYAHDRGRKVYVTMNVFPHNADLEGLEE
YIVGLNDLNVDAIIVSDPSIIMTAKEVAPDLEIHLSTQANNVNWKSAKFWHSLGVKRIVLARELSFKEIEKIHENLPEDC
DLEAFVHGSMCMAYSGRCLISNYMTGRDSNRGACSQACRYKYYLMEEKRPGEYFQVIEDDKGTYIMNSKDLCMIEYIPEL
VKSGIYSFKIEGRMKSPYYVAAIVKAYREALDKYWDDPEGYEFDQKLMDNLLKVSHRRYHTGFYFGKSGEQVYESSSYIR
DYDIVGVVRDYNEETKVATIEQRNRLFEGDTVEVLTPVGDYYEIQMNDMKDEKDEKIDVANKAQMIFKVKIDKPVKVNDM
LIKCKEANS
>Mature_409_residues
MRKPEILAPAGSLEKLKTAIDFGADAVYIGGSKLNLRAFADNFTNEQIAEGVKYAHDRGRKVYVTMNVFPHNADLEGLEE
YIVGLNDLNVDAIIVSDPSIIMTAKEVAPDLEIHLSTQANNVNWKSAKFWHSLGVKRIVLARELSFKEIEKIHENLPEDC
DLEAFVHGSMCMAYSGRCLISNYMTGRDSNRGACSQACRYKYYLMEEKRPGEYFQVIEDDKGTYIMNSKDLCMIEYIPEL
VKSGIYSFKIEGRMKSPYYVAAIVKAYREALDKYWDDPEGYEFDQKLMDNLLKVSHRRYHTGFYFGKSGEQVYESSSYIR
DYDIVGVVRDYNEETKVATIEQRNRLFEGDTVEVLTPVGDYYEIQMNDMKDEKDEKIDVANKAQMIFKVKIDKPVKVNDM
LIKCKEANS

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=445, Percent_Identity=37.0786516853933, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI87081910, Length=268, Percent_Identity=40.6716417910448, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1789548, Length=317, Percent_Identity=34.0694006309148, Blast_Score=172, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 46938; Mature: 46938

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPEILAPAGSLEKLKTAIDFGADAVYIGGSKLNLRAFADNFTNEQIAEGVKYAHDRGR
CCCCCEECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
KVYVTMNVFPHNADLEGLEEYIVGLNDLNVDAIIVSDPSIIMTAKEVAPDLEIHLSTQAN
EEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEHHHHCCCEEEEEEECCC
NVNWKSAKFWHSLGVKRIVLARELSFKEIEKIHENLPEDCDLEAFVHGSMCMAYSGRCLI
CCCCCHHHHHHHCCHHEEEHHHHCCHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCEEE
SNYMTGRDSNRGACSQACRYKYYLMEEKRPGEYFQVIEDDKGTYIMNSKDLCMIEYIPEL
EECCCCCCCCCCHHHHHHHEEEEEEECCCCCCEEEEEECCCCEEEECCCCEEHHHHHHHH
VKSGIYSFKIEGRMKSPYYVAAIVKAYREALDKYWDDPEGYEFDQKLMDNLLKVSHRRYH
HHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEE
TGFYFGKSGEQVYESSSYIRDYDIVGVVRDYNEETKVATIEQRNRLFEGDTVEVLTPVGD
CEEEECCCCHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEHHHCCCCCCCCEEEEECCCC
YYEIQMNDMKDEKDEKIDVANKAQMIFKVKIDKPVKVNDMLIKCKEANS
EEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCEEEEEECCCC
>Mature Secondary Structure
MRKPEILAPAGSLEKLKTAIDFGADAVYIGGSKLNLRAFADNFTNEQIAEGVKYAHDRGR
CCCCCEECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
KVYVTMNVFPHNADLEGLEEYIVGLNDLNVDAIIVSDPSIIMTAKEVAPDLEIHLSTQAN
EEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEHHHHCCCEEEEEEECCC
NVNWKSAKFWHSLGVKRIVLARELSFKEIEKIHENLPEDCDLEAFVHGSMCMAYSGRCLI
CCCCCHHHHHHHCCHHEEEHHHHCCHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCEEE
SNYMTGRDSNRGACSQACRYKYYLMEEKRPGEYFQVIEDDKGTYIMNSKDLCMIEYIPEL
EECCCCCCCCCCHHHHHHHEEEEEEECCCCCCEEEEEECCCCEEEECCCCEEHHHHHHHH
VKSGIYSFKIEGRMKSPYYVAAIVKAYREALDKYWDDPEGYEFDQKLMDNLLKVSHRRYH
HHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEE
TGFYFGKSGEQVYESSSYIRDYDIVGVVRDYNEETKVATIEQRNRLFEGDTVEVLTPVGD
CEEEECCCCHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEHHHCCCCCCCCEEEEECCCC
YYEIQMNDMKDEKDEKIDVANKAQMIFKVKIDKPVKVNDMLIKCKEANS
EEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]