Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310738

Identifier: 18310738

GI number: 18310738

Start: 2034413

End: 2035750

Strand: Reverse

Name: 18310738

Synonym: CPE1756

Alternate gene names: NA

Gene position: 2035750-2034413 (Counterclockwise)

Preceding gene: 18310739

Following gene: 18310737

Centisome position: 67.15

GC content: 30.57

Gene sequence:

>1338_bases
ATGAAAAGTAGAATTGCTGAAGTCTTACCAGGAGGAATTGGTGAGGAATTAGGCTTTGAAAAGGGAGATATACTATTAAG
CATAAACGGTACTAAAGTTGAAGATATACTTGATTATAGATTTTTATTAGCAGACGAATACGTTGAGGTAGAAATATTAA
AACCAAACAAAGAGGTTTGGGAATTTGAAATAGAAAAGGAATATGGCGAAGATTTAGGAGTGGAATTTGAAGAGGCCATC
CTAGACAAAGCTAAAAGTTGTACAAATAAATGTATATTTTGCTTCATAGATCAATTACCAAAGGGAATGAGAAAAACTTT
ATATTTTAAGGACGATGATTCAAGACTTTCATTTTTACAAGGTAACTTTGTTACTTTAACAAATATGAAGGATGAAGATA
TTGATAGAATTATAAAATATAGAATAAGTCCTATAAATGTATCAGTTCATACAACAAATCCAGATTTAAGAAAAAAAATT
CTTAATAATAGATTTGCAGGGAATGTATATGAAAGATTACAAAAATTAGCGGCAGCTGGTATAACTGTAAATGCTCAAAT
AGTTGTTATGCCAGGAATAAATAATGGAGACGAATTAGTTAGAACTGTAGAAGATCTTTATAAATTACGTCCTTCAATAG
AAAATGTTGCTGCTGTACCAATTGGAATAACAAAGTTTAGAGAAGGATTAGCTGACCTTGAAATATATAATAAAGAAACA
GCTAAAGAAGAATTAGATAGAATAAAAGTTCTTCAAGAAAAATATATGAAAGAAATAGGAAGCCCATTTGTAAGATTATC
AGATGAGTTTTATGTTATGGCAGATGAGGAAGTTCCAAATGAAGAATTCTATAATGGATATGAGCAAATAGAAGACGGAG
TTGGAATGATAAGACTTCTAAGAGAAACCATGGCAGTAGATATAAAGAATAAGTTAACTAAAAGTGGAAAAGGTAAATTT
ACTCTTATTACAGGAACATCTGCCTTTAAAGAATTAGATCAGGTTTGTACCGATATAAGAGAAGAGAATAATAATATAGA
TATTAAGTGTAAGGTTATATTAAATGATTTCTTTGGGCACACAATAACAGTTGCAGGACTTTTAACTGGGCAAGATGTTA
TTGCTCAACTTAAGGATAACATTGATAGTGAGTACTTAATTATGGCAGATAACATGTTTAGAAAAGGTTACGAGCCAGGA
GATATAACTCAAAGAATAATGTTAGATGATTTGACAGCAAAGGATATTGAGGAAAGATTGGGAGTTAAAGTTATAGTTTG
TAGCTATACAGGGGAAGACCTAATAGACTTAATAAATGAACACTGTGAGGAGGAATAA

Upstream 100 bases:

>100_bases
GAAACAAAACACAATATATAGGTATAAAGTTATTTCAGTTGACTACATTATTTAATTAAGGTAATATAACATAGATAGTA
CTAAAATAGGAGTGAAGCAT

Downstream 100 bases:

>100_bases
GAATGAGTAAACCAATAGTTGCTATGGTTGGAAGACCGAACGTAGGTAAGTCGACTCTTTTCAATAAATTAGCAGGAAAA
AGAATTTCAATAGTACAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAI
LDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKI
LNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET
AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKF
TLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPG
DITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE

Sequences:

>Translated_445_residues
MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAI
LDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKI
LNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET
AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKF
TLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPG
DITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE
>Mature_445_residues
MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAI
LDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKI
LNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET
AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKF
TLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPG
DITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50706; Mature: 50706

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVW
CCCCHHHHCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCE
EFEIEKEYGEDLGVEFEEAILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQ
EEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEECCCCCEEEEC
GNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKILNNRFAGNVYERLQKLAAAG
CCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCC
ITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET
CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHCCHHHHHHHCHHH
AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLL
HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH
RETMAVDIKNKLTKSGKGKFTLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGH
HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHCCC
TITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPGDITQRIMLDDLTAKDIEERL
CEEEEEHHCCHHHHHHHHHCCCCCEEEEECHHHHCCCCCCHHHHHHHHHCCCHHHHHHHC
GVKVIVCSYTGEDLIDLINEHCEEE
CEEEEEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVW
CCCCHHHHCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCE
EFEIEKEYGEDLGVEFEEAILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQ
EEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEECCCCCEEEEC
GNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKILNNRFAGNVYERLQKLAAAG
CCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCC
ITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET
CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHCCHHHHHHHCHHH
AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLL
HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH
RETMAVDIKNKLTKSGKGKFTLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGH
HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHCCC
TITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPGDITQRIMLDDLTAKDIEERL
CEEEEEHHCCHHHHHHHHHCCCCCEEEEECHHHHCCCCCCHHHHHHHHHCCCHHHHHHHC
GVKVIVCSYTGEDLIDLINEHCEEE
CEEEEEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA