Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310731

Identifier: 18310731

GI number: 18310731

Start: 2025914

End: 2026183

Strand: Reverse

Name: 18310731

Synonym: CPE1749

Alternate gene names: NA

Gene position: 2026183-2025914 (Counterclockwise)

Preceding gene: 18310732

Following gene: 18310730

Centisome position: 66.84

GC content: 33.33

Gene sequence:

>270_bases
ATGAGTATAAAGTTAATTAATATTGGTTTTGGAAACATAGTTTCAGCTAATAGATTAGTAGCAATAGTAAGTCCTGAATC
AGCACCTATAAAGAGAATCATACAAGAAGCTAGAGATAGAGGTATGCTTATAGATGCAACTTATGGTAGAAGAACAAGAG
CCGTAATAATTACAGATTCAGATCATGTAATTCTTTCAGCTGTTCAACCTGAGACAGTGGCTCACAGATTATCAACTAAG
GAAGAAGTAGTTGTTGAAGATGATGAATAA

Upstream 100 bases:

>100_bases
TCAACAGATTTAGAAATAACCAACAAGGTTATAGATATAAAAAATATTATTGAAAAGATTAGAGAACAAGTTCAAAACAT
AGAATAATAGGAGGTAGCAA

Downstream 100 bases:

>100_bases
GATACATAAGGATAATAGAGGTGTATTAATAGTTATTTCTGGTCCTTCAGGTGCAGGTAAGGGAACTATTTGTAAAGCCT
TATTAGAAAAACACGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLSTK
EEVVVEDDE

Sequences:

>Translated_89_residues
MSIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLSTK
EEVVVEDDE
>Mature_88_residues
SIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLSTKE
EVVVEDDE

Specific function: Unknown

COG id: COG2052

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0296 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007169
- ProDom:   PD063023 [H]

Pfam domain/function: PF04025 DUF370 [H]

EC number: NA

Molecular weight: Translated: 9810; Mature: 9679

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDS
CEEEEEEECCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCEEEEEEECC
DHVILSAVQPETVAHRLSTKEEVVVEDDE
CCEEEEECCCHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure 
SIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDS
EEEEEEECCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCEEEEEEECC
DHVILSAVQPETVAHRLSTKEEVVVEDDE
CCEEEEECCCHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA