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The map label for this gene is rsgA [H]

Identifier: 18310719

GI number: 18310719

Start: 2013230

End: 2014093

Strand: Reverse

Name: rsgA [H]

Synonym: CPE1737

Alternate gene names: 18310719

Gene position: 2014093-2013230 (Counterclockwise)

Preceding gene: 18310720

Following gene: 18310718

Centisome position: 66.44

GC content: 29.4

Gene sequence:

>864_bases
ATGGAAGGAATTATAATAAAAGGTATAGGTGGATTCTATTATATAAAAACAGATGAAGGAATTATTGAATGTAAAGCTAG
AGGTAAATTCAGATATAATTCATTAAAGCCTATGGTAGGAGATAGAGTTACCATAAAAGTAGAGAATGGAAAAGGTGTAA
TAGAGGATATACATGAGAGAAGCTCAGAGCTTATAAGACCAACTGTTGCAAACGTAACACAAGCTTTCGTTGTATTTGCA
ATAAAAAATCCTGACATAAATTTAGATTTATTAAATAGATTTTTAACTCTTTGTGAGTATAATGATATACATGCAGTTGT
ATGTTTAAATAAAGAAGATTTATGTACAGAGGAGGAAAAAGAAAACTTAAAAGAATTAATAAATGATATAGGTTATGAGG
TTCTCTTCATAAATGCCAAGGAAGGAAAAGGTTTTGATGCTTTAAAGGAAAGATTAGAACATAACATAACAGTCCTTTGT
GGCCCTTCTGGAGCAGGAAAATCTACACTTTTAAATTCTTTTATAGATAGAGAACATATGGAAACAGGAAGTGTAAGTGA
AAAAATAGGAAGAGGTAAGCATACTACTAGACATAGCGAACTTATAGATGTAGACAATGGATACTTAGTTGATACTCCAG
GATTTACAACTTTAGATGTTACTTTTATAGATAGAGATAGCTTAAAATATTGCTTCCCAGAATTTAATGATTATAATAAT
CTTTGCAAATTTAATGGATGTAATCATTATAAAGAACCTAAGTGTGCTGTAAAAGAAGCAGTTGAAGAGGGTAAAATAAA
CAAGCTAAGATATGAATTTTATATAAAAACCTTAGAAGAGATAATAAATAGGAGGGGTAATTAA

Upstream 100 bases:

>100_bases
AAGGAACGGAAAAGAGTCTATATAATTATTAAGATTCTTGCATTTTATATTAAAATTTGTTTATTATAAGAATATATAAT
ATTAAAGATAGGGAGGAAAC

Downstream 100 bases:

>100_bases
TGGTTAAAATAGCACCATCAATATTATCAGCAGATTTTAGTATTTTAGGAGAACAAGTTAAGAGAGTAGAAAAAGGTGGG
GCAGAGTTCTTACATATAGA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHERSSELIRPTVANVTQAFVVFA
IKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEKENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLC
GPSGAGKSTLLNSFIDREHMETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNN
LCKFNGCNHYKEPKCAVKEAVEEGKINKLRYEFYIKTLEEIINRRGN

Sequences:

>Translated_287_residues
MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHERSSELIRPTVANVTQAFVVFA
IKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEKENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLC
GPSGAGKSTLLNSFIDREHMETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNN
LCKFNGCNHYKEPKCAVKEAVEEGKINKLRYEFYIKTLEEIINRRGN
>Mature_287_residues
MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHERSSELIRPTVANVTQAFVVFA
IKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEKENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLC
GPSGAGKSTLLNSFIDREHMETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNN
LCKFNGCNHYKEPKCAVKEAVEEGKINKLRYEFYIKTLEEIINRRGN

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=301, Percent_Identity=34.21926910299, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 32649; Mature: 32649

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHER
CCCEEEEECCCEEEEECCCCEEEEEECCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHH
SSELIRPTVANVTQAFVVFAIKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEK
HHHHHCHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHCCCHHHH
ENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLCGPSGAGKSTLLNSFIDREHM
HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHC
ETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNN
CCCCHHHHHCCCCCCCCCCCEEECCCCEEEECCCCEEEEEEEECCCCCHHCCCCCCCCCC
LCKFNGCNHYKEPKCAVKEAVEEGKINKLRYEFYIKTLEEIINRRGN
EEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHER
CCCEEEEECCCEEEEECCCCEEEEEECCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHH
SSELIRPTVANVTQAFVVFAIKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEK
HHHHHCHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHCCCHHHH
ENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLCGPSGAGKSTLLNSFIDREHM
HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHC
ETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNN
CCCCHHHHHCCCCCCCCCCCEEECCCCEEEECCCCEEEEEEEECCCCCHHCCCCCCCCCC
LCKFNGCNHYKEPKCAVKEAVEEGKINKLRYEFYIKTLEEIINRRGN
EEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA