| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is coaD [H]
Identifier: 18310711
GI number: 18310711
Start: 2005903
End: 2006397
Strand: Reverse
Name: coaD [H]
Synonym: CPE1729
Alternate gene names: 18310711
Gene position: 2006397-2005903 (Counterclockwise)
Preceding gene: 18310712
Following gene: 18310710
Centisome position: 66.19
GC content: 31.11
Gene sequence:
>495_bases ATGAGAGTAGGGGTTTATCCAGGAAGTTTTGACCCTATTACTAAAGGACATCTAGACCTTATTGAAAGAGCGGCAAGTAA ATTTGATAAGGTCATAGTTGCTGTTCTTATAAACATAAATAAAAAAGGTATGTTTTCTATAGAAGAAAGGGTTAATCTTA TAGAGAAGTGCGTTGCAAAATACAATAATGTTGAGGTTAAAAGTTTTAATGGACTTTTAATTGATTTTGTGAGAAAAGAA AAAGCAGATGTAATAATAAAAGGTTTAAGATCAGTTACTGATTTTGAATATGAATTCCAAATGGCACTTATGAACAGAGA ATTAGCAAATGAGGTTGAAACTGTATTTATGGTTACAAGCCCTAATTACTCTTATATAAGCTCGTCTGCAATAAAGCAGG TTGCAAGTTTTAATGGAGAAATAAAAAACTTTGTTCCAAAAGAGATAGTAGAGGATTTAGAAGAAAGGATTATTAGTTTA AGAGGGGAGGGATAA
Upstream 100 bases:
>100_bases AGTGAAGAAATTTTTGAGGGAACTGAAAAGATAAAGCTTACAAAAGTTAAGAAGTATGGAAATACAACAGTTTGCTTTTA TAAAATAGAGGAGGACTAAA
Downstream 100 bases:
>100_bases TTATTAACATGGAGTCACAAGTTATTGAAATTTTAGATTACTTAAGAGATATTGTTGAGGGAGCTTCTAAGGTCCCTATA ACAGGTAAGGTTGTTGTTGA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRVGVYPGSFDPITKGHLDLIERAASKFDKVIVAVLININKKGMFSIEERVNLIEKCVAKYNNVEVKSFNGLLIDFVRKE KADVIIKGLRSVTDFEYEFQMALMNRELANEVETVFMVTSPNYSYISSSAIKQVASFNGEIKNFVPKEIVEDLEERIISL RGEG
Sequences:
>Translated_164_residues MRVGVYPGSFDPITKGHLDLIERAASKFDKVIVAVLININKKGMFSIEERVNLIEKCVAKYNNVEVKSFNGLLIDFVRKE KADVIIKGLRSVTDFEYEFQMALMNRELANEVETVFMVTSPNYSYISSSAIKQVASFNGEIKNFVPKEIVEDLEERIISL RGEG >Mature_164_residues MRVGVYPGSFDPITKGHLDLIERAASKFDKVIVAVLININKKGMFSIEERVNLIEKCVAKYNNVEVKSFNGLLIDFVRKE KADVIIKGLRSVTDFEYEFQMALMNRELANEVETVFMVTSPNYSYISSSAIKQVASFNGEIKNFVPKEIVEDLEERIISL RGEG
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=154, Percent_Identity=46.1038961038961, Blast_Score=164, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 18589; Mature: 18589
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGVYPGSFDPITKGHLDLIERAASKFDKVIVAVLININKKGMFSIEERVNLIEKCVAK CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH YNNVEVKSFNGLLIDFVRKEKADVIIKGLRSVTDFEYEFQMALMNRELANEVETVFMVTS HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEEEEEC PNYSYISSSAIKQVASFNGEIKNFVPKEIVEDLEERIISLRGEG CCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVGVYPGSFDPITKGHLDLIERAASKFDKVIVAVLININKKGMFSIEERVNLIEKCVAK CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH YNNVEVKSFNGLLIDFVRKEKADVIIKGLRSVTDFEYEFQMALMNRELANEVETVFMVTS HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEEEEEC PNYSYISSSAIKQVASFNGEIKNFVPKEIVEDLEERIISLRGEG CCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA