Click here to switch to the map view.

The map label for this gene is 18310649

Identifier: 18310649

GI number: 18310649

Start: 1941795

End: 1942124

Strand: Reverse

Name: 18310649

Synonym: CPE1667

Alternate gene names: NA

Gene position: 1942124-1941795 (Counterclockwise)

Preceding gene: 18310650

Following gene: 18310647

Centisome position: 64.07

GC content: 26.97

Gene sequence:

>330_bases
ATGAATAAAGTGGATCTTATTGGAAGAGTTGCTACTAAAATTGAAGTTAAGGAATCTAAAAATAAGAAAAAATATGTTAG
ATTTAGAATAGCTGTTAATAGTTTTAATGGAAGAGAAGAAACAACTACTTTTTTAAGTGTAATTACTTGGAGTAAATCTA
CAGTGGATTTCTTAGAGAAATTTGTGAACATAGGAGACTTAGTCTCTGTAAGTGGAGAAATAGTAGAAAGTAGATACGAA
AGTGAAAGTGGAGAAGTTAGATATTATACAAATATACAAACTTCTAATATAAATCTTCTTAATAAAGCAAAAGAAAAAGA
GATTTCATAG

Upstream 100 bases:

>100_bases
TATTAAATTAATTTGTTAAAAAAAATTTAAAGAACACATGTTTGAGACTCTTAAATCTGGTCAATACTTTAGATAAATTA
TAATCAAGGAGATGAAAAGC

Downstream 100 bases:

>100_bases
TAAAGAAAAAAAGATATATTGTGAAAATATATCTTTTTATTTTGCTTCTAAAAGTTTTGTAAAATAATTTCTTGGAATTA
ATCCTTTTTTTATACCATTT

Product: single-strand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNKVDLIGRVATKIEVKESKNKKKYVRFRIAVNSFNGREETTTFLSVITWSKSTVDFLEKFVNIGDLVSVSGEIVESRYE
SESGEVRYYTNIQTSNINLLNKAKEKEIS

Sequences:

>Translated_109_residues
MNKVDLIGRVATKIEVKESKNKKKYVRFRIAVNSFNGREETTTFLSVITWSKSTVDFLEKFVNIGDLVSVSGEIVESRYE
SESGEVRYYTNIQTSNINLLNKAKEKEIS
>Mature_109_residues
MNKVDLIGRVATKIEVKESKNKKKYVRFRIAVNSFNGREETTTFLSVITWSKSTVDFLEKFVNIGDLVSVSGEIVESRYE
SESGEVRYYTNIQTSNINLLNKAKEKEIS

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12488; Mature: 12488

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVDLIGRVATKIEVKESKNKKKYVRFRIAVNSFNGREETTTFLSVITWSKSTVDFLEK
CCCHHHHHHHHHEEEECCCCCCCEEEEEEEEEECCCCCCHHHHEEEEEECCCHHHHHHHH
FVNIGDLVSVSGEIVESRYESESGEVRYYTNIQTSNINLLNKAKEKEIS
HHCCCCHHHCCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCC
>Mature Secondary Structure
MNKVDLIGRVATKIEVKESKNKKKYVRFRIAVNSFNGREETTTFLSVITWSKSTVDFLEK
CCCHHHHHHHHHEEEECCCCCCCEEEEEEEEEECCCCCCHHHHEEEEEECCCHHHHHHHH
FVNIGDLVSVSGEIVESRYESESGEVRYYTNIQTSNINLLNKAKEKEIS
HHCCCCHHHCCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA