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The map label for this gene is 18310648

Identifier: 18310648

GI number: 18310648

Start: 1941144

End: 1941758

Strand: Direct

Name: 18310648

Synonym: CPE1666

Alternate gene names: NA

Gene position: 1941144-1941758 (Clockwise)

Preceding gene: 18310644

Following gene: 18310687

Centisome position: 64.03

GC content: 27.64

Gene sequence:

>615_bases
ATGAAATTACTTTTTTTTGATACAGAAACTACAGGAGTCAAACCTGGAAGCATATGTCAGCTTAGTTATATCCTTGTAGA
CACTTCAACTAAACCTCAAAAAACAATAGGTAAAAATATATTCTTTACAGTTGATGAAATGGAACCAGAAGCTGAAAGAA
TCCATGGTTTTTCTTTAGAGAAATTATATGAATTAAGTGAAGGGATGTACTTTGAAGATCTTTATGCTGATTTTATAAAT
GACTTCTTAGAAGCAGATTTTATAATAGGTCATAACGTTCAGTTTGATATTAAATTCTTAAAACATGAATTACTAGGTCT
TGGAGAGTTCTTTGAACCTAACAACGTATTTTGTACTATGAAATATTATAAAGATATTTGTAAAATATTAAGACCTACTG
GAGATTATAAAAATCCTAAACTTGAAGAAGTAATCAAACACTTAAATATAACTGATTCTGAAATAAGTGAAACTGCTAAT
AAGTATTTCCAAGGTAGTGGAAACTATCATGATGCTAGATTTGATACAGCAGCAACTTATCTTACTGTTATAAATGGTAT
AAAAAAAGGATTAATTCCAAGAAATTATTTTACAAAACTTTTAGAAGCAAAATAA

Upstream 100 bases:

>100_bases
TTCTATAATCTATAATATATAAATTTTAAATTAGATTTTATTAATAAAAATTTTAGTTTATACTATTATATGGACATTAG
AATATGGGAGGCCTTAAATA

Downstream 100 bases:

>100_bases
AAAGATATATTTTCACAATATATCTTTTTTTCTTTACTATGAAATCTCTTTTTCTTTTGCTTTATTAAGAAGATTTATAT
TAGAAGTTTGTATATTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Exonuclease; DNA Polymerase III Epsilon Subunit

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKLLFFDTETTGVKPGSICQLSYILVDTSTKPQKTIGKNIFFTVDEMEPEAERIHGFSLEKLYELSEGMYFEDLYADFIN
DFLEADFIIGHNVQFDIKFLKHELLGLGEFFEPNNVFCTMKYYKDICKILRPTGDYKNPKLEEVIKHLNITDSEISETAN
KYFQGSGNYHDARFDTAATYLTVINGIKKGLIPRNYFTKLLEAK

Sequences:

>Translated_204_residues
MKLLFFDTETTGVKPGSICQLSYILVDTSTKPQKTIGKNIFFTVDEMEPEAERIHGFSLEKLYELSEGMYFEDLYADFIN
DFLEADFIIGHNVQFDIKFLKHELLGLGEFFEPNNVFCTMKYYKDICKILRPTGDYKNPKLEEVIKHLNITDSEISETAN
KYFQGSGNYHDARFDTAATYLTVINGIKKGLIPRNYFTKLLEAK
>Mature_204_residues
MKLLFFDTETTGVKPGSICQLSYILVDTSTKPQKTIGKNIFFTVDEMEPEAERIHGFSLEKLYELSEGMYFEDLYADFIN
DFLEADFIIGHNVQFDIKFLKHELLGLGEFFEPNNVFCTMKYYKDICKILRPTGDYKNPKLEEVIKHLNITDSEISETAN
KYFQGSGNYHDARFDTAATYLTVINGIKKGLIPRNYFTKLLEAK

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23567; Mature: 23567

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFFDTETTGVKPGSICQLSYILVDTSTKPQKTIGKNIFFTVDEMEPEAERIHGFSLE
CEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHCCCEEEEEECCCCHHHHHCCCCHH
KLYELSEGMYFEDLYADFINDFLEADFIIGHNVQFDIKFLKHELLGLGEFFEPNNVFCTM
HHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCEEHHHHHHHHHHCCCCCCCCCCEEEEH
KYYKDICKILRPTGDYKNPKLEEVIKHLNITDSEISETANKYFQGSGNYHDARFDTAATY
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LTVINGIKKGLIPRNYFTKLLEAK
HHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKLLFFDTETTGVKPGSICQLSYILVDTSTKPQKTIGKNIFFTVDEMEPEAERIHGFSLE
CEEEEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHCCCEEEEEECCCCHHHHHCCCCHH
KLYELSEGMYFEDLYADFINDFLEADFIIGHNVQFDIKFLKHELLGLGEFFEPNNVFCTM
HHHHHHCCCCHHHHHHHHHHHHHHCCEEECCCCEEHHHHHHHHHHCCCCCCCCCCEEEEH
KYYKDICKILRPTGDYKNPKLEEVIKHLNITDSEISETANKYFQGSGNYHDARFDTAATY
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
LTVINGIKKGLIPRNYFTKLLEAK
HHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA