| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is feoB [H]
Identifier: 18310642
GI number: 18310642
Start: 1931580
End: 1933343
Strand: Direct
Name: feoB [H]
Synonym: CPE1660
Alternate gene names: 18310642
Gene position: 1931580-1933343 (Clockwise)
Preceding gene: 18310641
Following gene: 18310644
Centisome position: 63.72
GC content: 30.95
Gene sequence:
>1764_bases ATGACAACAATAGCCTTACTCGGTAATCCTAATGTTGGTAAAACTACTCTTTTTAATGCCTTAACAGGGTCTAACCAACA TGTAGGAAACTGGCCAGGTGTTACAGTTGATAAAAAGGAAGGACTTTTCAACTCTAACAAAATAGTGGATTTACCTGGTA TATATGCTTTAGATACCTTCTCAAACGAAGAAAAAGTATCTAAGAAATTCTTAGAATCTGGAGATGTTGATTTAATATTA AATATAGTAGATGCTTCTAACCTAGATAGAAATCTATATTTAACTATGCAACTTAAGGACTTTAAGAAGCCAATAGTATT GCTTCTTAACATGAATGACATCGCTGAGAAAAAAGGAATCAAAATTGATCCTAAAAAATTAGAAAAGGCTTTTAATCTTA AAGTAATTCCTATAACAGCATCTAAAAAAGAAGGCTTAGATGAGGTTAAAGAATTCTTAAATAAAGGTAATTTCGAAAAA TATTTAGATAAAAATACTTACTCATTTAAGGATGAGGCTCATACTTATAAATTTATTGAAGATAAATTATCAGACTGCTT TAATAGATCAGGTAATTCTTCAACTACTTTAACAGATAAGTTAGATAAAATATTTTTAAACCCATGGCTTGCATACCCAT TATTTATAGCACTTATGTACTTTGTATTTCAATTTACATTCTCATGGGTTGGACAACCTATTTCAGACGCTTTAGATGGA TTCTTAGGTGATACTTTCATGCCATACTTAAGTGATCTATTATCAGGTACGGCTCCATGGTTCCAATCATTACTTGTTGA TGGTATCGTAGCCGGTGTAGGTGGAATTATAGTCTTATTACCAATAATATTAGCTTTATTCTTATGTATAGCAATATTAG AAGACAGTGGATATATGGCTAGAGTTGCTTTCTTAATGGATAAGTTCATGAGAAAAATAGGACTTTCAGGAAAGGCTTTC CTTCCTATGATAACAGGATTTGGATGTACAGTTCCTGCTATTATGTCAGCTAGAACTTTAGAAAGCGAAAAGGATAGAAA ACTTACTGCTCTTTTAGCACCATTTATGTCATGTAATGCTAGACTACCTGTATATGTAATATTTGCTGGATTATTCTTTC CAGATAATGCATCTATGGTTGTTGCATCTTTATACATATTAGGTATATTAGTAGCTTTCATATTAGGCTTAGTATTTAAA AATACTTTATTCAAGAAAGATGAAGACCCATTCATTATAGAACTTCCTGAATATAAAGTACCAGAAGTTAGATCTGTATT AGCTCAACTTTGGGATAAATCAAAGAGCTTCTTAAAGAAAGCTGGAACTATTATCTTTGCAATGAGTGTTGTTATTTGGT TCCTTCAAAGCTTTAACTTTACTGGAATGGTTGAGGATATAACTCATAGTTTCTTATATAACATAGGTTCATTTATAGCT CCAATATTTGCTCCATTAGGATTTGGAGATTGGCAAGCTTCAGTTTCATTATTAACTGGTTTAATGGCTAAAGAAACTAT AATATCAACAATGGAAGTTATTTATAAAGGTGATTTAACTCATATGTTACCTCAATTCTTTACAGCACTTTCATCTTACT CATTCATGGTATTTGTATTACTTTATACACCATGTATAAGTGTTGTAGGGGTTATGAAAAAAGAATATGGTGGTAAGTTC ACAATTTTATCAGTAATATTCCAGTTCCTAGTTGCTTGGATAAGTGCCTTCATAATTTATCATATCGGTTTATTAATCTT TTAA
Upstream 100 bases:
>100_bases AATTTAAGAGGATTTGATTTAGCAATCAGAAAGAAAGATGCTAAAAATATAATTTTAAAATAATAAATAAAATAGAATAA TTTAATTAGGGGGAAAACTA
Downstream 100 bases:
>100_bases AGAAGGTGTTTTAAATGGAAATTCTTATTACAGCTTTAATCGTAATAGCTGTTGTGTTTATATTATACAAAAACTTCAAA AAATCATCTAAAGGACAATG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTTIALLGNPNVGKTTLFNALTGSNQHVGNWPGVTVDKKEGLFNSNKIVDLPGIYALDTFSNEEKVSKKFLESGDVDLIL NIVDASNLDRNLYLTMQLKDFKKPIVLLLNMNDIAEKKGIKIDPKKLEKAFNLKVIPITASKKEGLDEVKEFLNKGNFEK YLDKNTYSFKDEAHTYKFIEDKLSDCFNRSGNSSTTLTDKLDKIFLNPWLAYPLFIALMYFVFQFTFSWVGQPISDALDG FLGDTFMPYLSDLLSGTAPWFQSLLVDGIVAGVGGIIVLLPIILALFLCIAILEDSGYMARVAFLMDKFMRKIGLSGKAF LPMITGFGCTVPAIMSARTLESEKDRKLTALLAPFMSCNARLPVYVIFAGLFFPDNASMVVASLYILGILVAFILGLVFK NTLFKKDEDPFIIELPEYKVPEVRSVLAQLWDKSKSFLKKAGTIIFAMSVVIWFLQSFNFTGMVEDITHSFLYNIGSFIA PIFAPLGFGDWQASVSLLTGLMAKETIISTMEVIYKGDLTHMLPQFFTALSSYSFMVFVLLYTPCISVVGVMKKEYGGKF TILSVIFQFLVAWISAFIIYHIGLLIF
Sequences:
>Translated_587_residues MTTIALLGNPNVGKTTLFNALTGSNQHVGNWPGVTVDKKEGLFNSNKIVDLPGIYALDTFSNEEKVSKKFLESGDVDLIL NIVDASNLDRNLYLTMQLKDFKKPIVLLLNMNDIAEKKGIKIDPKKLEKAFNLKVIPITASKKEGLDEVKEFLNKGNFEK YLDKNTYSFKDEAHTYKFIEDKLSDCFNRSGNSSTTLTDKLDKIFLNPWLAYPLFIALMYFVFQFTFSWVGQPISDALDG FLGDTFMPYLSDLLSGTAPWFQSLLVDGIVAGVGGIIVLLPIILALFLCIAILEDSGYMARVAFLMDKFMRKIGLSGKAF LPMITGFGCTVPAIMSARTLESEKDRKLTALLAPFMSCNARLPVYVIFAGLFFPDNASMVVASLYILGILVAFILGLVFK NTLFKKDEDPFIIELPEYKVPEVRSVLAQLWDKSKSFLKKAGTIIFAMSVVIWFLQSFNFTGMVEDITHSFLYNIGSFIA PIFAPLGFGDWQASVSLLTGLMAKETIISTMEVIYKGDLTHMLPQFFTALSSYSFMVFVLLYTPCISVVGVMKKEYGGKF TILSVIFQFLVAWISAFIIYHIGLLIF >Mature_586_residues TTIALLGNPNVGKTTLFNALTGSNQHVGNWPGVTVDKKEGLFNSNKIVDLPGIYALDTFSNEEKVSKKFLESGDVDLILN IVDASNLDRNLYLTMQLKDFKKPIVLLLNMNDIAEKKGIKIDPKKLEKAFNLKVIPITASKKEGLDEVKEFLNKGNFEKY LDKNTYSFKDEAHTYKFIEDKLSDCFNRSGNSSTTLTDKLDKIFLNPWLAYPLFIALMYFVFQFTFSWVGQPISDALDGF LGDTFMPYLSDLLSGTAPWFQSLLVDGIVAGVGGIIVLLPIILALFLCIAILEDSGYMARVAFLMDKFMRKIGLSGKAFL PMITGFGCTVPAIMSARTLESEKDRKLTALLAPFMSCNARLPVYVIFAGLFFPDNASMVVASLYILGILVAFILGLVFKN TLFKKDEDPFIIELPEYKVPEVRSVLAQLWDKSKSFLKKAGTIIFAMSVVIWFLQSFNFTGMVEDITHSFLYNIGSFIAP IFAPLGFGDWQASVSLLTGLMAKETIISTMEVIYKGDLTHMLPQFFTALSSYSFMVFVLLYTPCISVVGVMKKEYGGKFT ILSVIFQFLVAWISAFIIYHIGLLIF
Specific function: It seems that the Fe(2+) uptake in C.jejuni cannot be attributed to feoB [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=718, Percent_Identity=33.4261838440111, Blast_Score=378, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011642 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 65592; Mature: 65461
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIALLGNPNVGKTTLFNALTGSNQHVGNWPGVTVDKKEGLFNSNKIVDLPGIYALDTF CCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEECCC SNEEKVSKKFLESGDVDLILNIVDASNLDRNLYLTMQLKDFKKPIVLLLNMNDIAEKKGI CCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEECCHHHHHHCCC KIDPKKLEKAFNLKVIPITASKKEGLDEVKEFLNKGNFEKYLDKNTYSFKDEAHTYKFIE CCCHHHHHHHHCCEEEEECCCHHCCHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHH DKLSDCFNRSGNSSTTLTDKLDKIFLNPWLAYPLFIALMYFVFQFTFSWVGQPISDALDG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FLGDTFMPYLSDLLSGTAPWFQSLLVDGIVAGVGGIIVLLPIILALFLCIAILEDSGYMA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RVAFLMDKFMRKIGLSGKAFLPMITGFGCTVPAIMSARTLESEKDRKLTALLAPFMSCNA HHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC RLPVYVIFAGLFFPDNASMVVASLYILGILVAFILGLVFKNTLFKKDEDPFIIELPEYKV CCCHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC PEVRSVLAQLWDKSKSFLKKAGTIIFAMSVVIWFLQSFNFTGMVEDITHSFLYNIGSFIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH PIFAPLGFGDWQASVSLLTGLMAKETIISTMEVIYKGDLTHMLPQFFTALSSYSFMVFVL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LYTPCISVVGVMKKEYGGKFTILSVIFQFLVAWISAFIIYHIGLLIF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TTIALLGNPNVGKTTLFNALTGSNQHVGNWPGVTVDKKEGLFNSNKIVDLPGIYALDTF CEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEECCC SNEEKVSKKFLESGDVDLILNIVDASNLDRNLYLTMQLKDFKKPIVLLLNMNDIAEKKGI CCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEECCHHHHHHCCC KIDPKKLEKAFNLKVIPITASKKEGLDEVKEFLNKGNFEKYLDKNTYSFKDEAHTYKFIE CCCHHHHHHHHCCEEEEECCCHHCCHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHH DKLSDCFNRSGNSSTTLTDKLDKIFLNPWLAYPLFIALMYFVFQFTFSWVGQPISDALDG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FLGDTFMPYLSDLLSGTAPWFQSLLVDGIVAGVGGIIVLLPIILALFLCIAILEDSGYMA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RVAFLMDKFMRKIGLSGKAFLPMITGFGCTVPAIMSARTLESEKDRKLTALLAPFMSCNA HHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC RLPVYVIFAGLFFPDNASMVVASLYILGILVAFILGLVFKNTLFKKDEDPFIIELPEYKV CCCHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC PEVRSVLAQLWDKSKSFLKKAGTIIFAMSVVIWFLQSFNFTGMVEDITHSFLYNIGSFIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH PIFAPLGFGDWQASVSLLTGLMAKETIISTMEVIYKGDLTHMLPQFFTALSSYSFMVFVL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LYTPCISVVGVMKKEYGGKFTILSVIFQFLVAWISAFIIYHIGLLIF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]