Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310634

Identifier: 18310634

GI number: 18310634

Start: 1925171

End: 1926172

Strand: Direct

Name: 18310634

Synonym: CPE1652

Alternate gene names: NA

Gene position: 1925171-1926172 (Clockwise)

Preceding gene: 18310630

Following gene: 18310636

Centisome position: 63.51

GC content: 26.75

Gene sequence:

>1002_bases
ATGGATAAAAAATCTATACCCTTTGATAAGCTTAAGTTTTACTATGGAATTCCCCATTCCCATACATCCTTATCAACAGG
AAAAAGTAGTCCTTATGAATCCTTAGAACATGCTCGCTCTAATGGATTAGATTTTTTAATAATTACTGATCATAATAAAT
ATTTAAGCGAAACTATCAAAGAAAAAAATAAAGAAATTTCAAAATGGGAGTATTTAAATAAGTGCATAAATAAATTTAAT
AAAAAACATTCTGATTTTTTAGCCTTATGTGGTTTTGAAGCTAAATCAACAACCTTAGGTCACTTAAATATCCTATGTCC
TAATACATTTTTTACTGGAATAATTCCAGACATTAAATATCTATTACTTTGGCTCATTAATGATCACACAGCCTTACTTA
GTATTAATCATCCTAAAAATTCCATAGCTAAAAAATTTGAATTTACGCCTATTTTAGATAAACTTTTATGTTCTATAGAG
GTTGGAAATGGAATTCCACCTAGTACTTATACAAGATATGACTCTCAATTTTTCTCCCTTTTAGATAAGGGATTTAAACT
AGGAGCTATAAATTCCCAAGACAATCACAAATTAAATCAAGGAGATAGCGAAAATTTAACCTGCGTAATTTCACATAAAT
TAAATAAAAACTCCTTACTTGATGCATTTAAAAATAGACATATATTTTCAACGGAATCAAAAACTTTAAAAATGCTATTT
TCTTTAAATTCAACCTTTATGGGGGGAACAATAACTGTAGATTCCTCTTCAAAAATTAGTCTCTATTTACAAGTTGAAGA
TCATATAAACAAAATATCTAAAGTTCAATTTTTAACTAACCAGGGAAAAATCATTAAAGAAATTAAAGATATAGATTTGC
ATAATGTTAAATATATTTTTGAAAAGGAAGTTTCTTTAAATGAAACTTGGTTTGTAGCTAAAGTTTATTTAAATAACAAT
AAAGAGGCCATGTCCTCTCCAATCTTTGTTAATTATGAATAA

Upstream 100 bases:

>100_bases
ATATACTTAAAAAATCATATATAAAAATAATAAATAAAACACATTTAATCTAAATATTATAAATATTATATACTATACTA
ATATTTATAAAGAGGTATTA

Downstream 100 bases:

>100_bases
AAAAACAAACTCCATTAATAATGGAGTTTATTTTTTTGAATCCTTATTATGTTTAACTCTATTTGGTTTTGCCTTTGGTT
TAATAACAACTTTTTTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: PHP Domain Protein; Metallophosphoesterase; PHP C-Terminal Domain Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Ig Domain Domain Protein; Ig Domain Protein

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIKEKNKEISKWEYLNKCINKFN
KKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKYLLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIE
VGNGIPPSTYTRYDSQFFSLLDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF
SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIFEKEVSLNETWFVAKVYLNNN
KEAMSSPIFVNYE

Sequences:

>Translated_333_residues
MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIKEKNKEISKWEYLNKCINKFN
KKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKYLLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIE
VGNGIPPSTYTRYDSQFFSLLDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF
SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIFEKEVSLNETWFVAKVYLNNN
KEAMSSPIFVNYE
>Mature_333_residues
MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIKEKNKEISKWEYLNKCINKFN
KKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKYLLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIE
VGNGIPPSTYTRYDSQFFSLLDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF
SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIFEKEVSLNETWFVAKVYLNNN
KEAMSSPIFVNYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38111; Mature: 38111

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIK
CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
EKNKEISKWEYLNKCINKFNKKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKY
HHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHH
LLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIEVGNGIPPSTYTRYDSQFFSL
HHHHEECCCEEEEEECCCHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
LDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF
HHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEECCHHHHHHHH
SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIF
HHCCCCCCCEEEECCCCEEEEEEEEHHHHCHHHHHEEECCCCHHHHHHHCCCCCCEEEEE
EKEVSLNETWFVAKVYLNNNKEAMSSPIFVNYE
ECCCCCCCEEEEEEEEECCCHHHHCCCEEEEEC
>Mature Secondary Structure
MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIK
CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
EKNKEISKWEYLNKCINKFNKKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKY
HHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHH
LLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIEVGNGIPPSTYTRYDSQFFSL
HHHHEECCCEEEEEECCCHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
LDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF
HHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEECCHHHHHHHH
SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIF
HHCCCCCCCEEEECCCCEEEEEEEEHHHHCHHHHHEEECCCCHHHHHHHCCCCCCEEEEE
EKEVSLNETWFVAKVYLNNNKEAMSSPIFVNYE
ECCCCCCCEEEEEEEEECCCHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA