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The map label for this gene is yrdA [C]

Identifier: 18310633

GI number: 18310633

Start: 1924419

End: 1924922

Strand: Reverse

Name: yrdA [C]

Synonym: CPE1651

Alternate gene names: 18310633

Gene position: 1924922-1924419 (Counterclockwise)

Preceding gene: 18310635

Following gene: 18310632

Centisome position: 63.5

GC content: 32.34

Gene sequence:

>504_bases
ATGTTAATTGAAATTAGAGGAAAGAAGCCTGAAATAGGGGAAAAAACATTTATAGCTCACAGTAGTGATATCATTGGTGA
TGTTACTATAGGAAGAGATTGTGGAATTTGGTTTGGATCTGTAATAAGAGGAGACGATAATTTAATTAAAATAGGAAATG
AAACCAATGTACAAGATAATGCAGTATTACATGTTGATAAGGAGCACACTATTGAAATTGGGAGTGGTGTTACTATAGGA
CATGGTGCTATAATACATGGGTGTAAGATAGAGGATGAATGCCTAATTGGTATGGGAGCAATAATACTAAATGGAGCAAA
AATAGGAAAAAATACTATGATTGCTGCAGGAACTTTAGTAAGTCAAAACAAGGAAATACCAGAGGGCGTATTAGTCATGG
GAGTTCCAGGAAAGGTTGTTAGAAAACTTACTGAGGATGAAATTGAAAGTATAAAAAATTCAAGAAGAGAATATGTAAAG
ATGAAAAATCTTTATATTAAATAA

Upstream 100 bases:

>100_bases
TCTTTAAAATAGAAAAGATTAAATTAAGCATACAAAAGCATAAGTAGACATATTCTACTTTCATATGATAAAATTACAAG
AATGACTAAGAGGTGATCAT

Downstream 100 bases:

>100_bases
AGGAGGAGCTTATGATAATAAACATAGGACAATTTAATAAAATGAAAGTAGTAAGAGAAGCGGATTTTGGATACTACTTA
GACAGAGGAACTAGAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLIEIRGKKPEIGEKTFIAHSSDIIGDVTIGRDCGIWFGSVIRGDDNLIKIGNETNVQDNAVLHVDKEHTIEIGSGVTIG
HGAIIHGCKIEDECLIGMGAIILNGAKIGKNTMIAAGTLVSQNKEIPEGVLVMGVPGKVVRKLTEDEIESIKNSRREYVK
MKNLYIK

Sequences:

>Translated_167_residues
MLIEIRGKKPEIGEKTFIAHSSDIIGDVTIGRDCGIWFGSVIRGDDNLIKIGNETNVQDNAVLHVDKEHTIEIGSGVTIG
HGAIIHGCKIEDECLIGMGAIILNGAKIGKNTMIAAGTLVSQNKEIPEGVLVMGVPGKVVRKLTEDEIESIKNSRREYVK
MKNLYIK
>Mature_167_residues
MLIEIRGKKPEIGEKTFIAHSSDIIGDVTIGRDCGIWFGSVIRGDDNLIKIGNETNVQDNAVLHVDKEHTIEIGSGVTIG
HGAIIHGCKIEDECLIGMGAIILNGAKIGKNTMIAAGTLVSQNKEIPEGVLVMGVPGKVVRKLTEDEIESIKNSRREYVK
MKNLYIK

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=173, Percent_Identity=41.0404624277457, Blast_Score=137, Evalue=3e-34,
Organism=Escherichia coli, GI1787667, Length=157, Percent_Identity=35.031847133758, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87081681, Length=156, Percent_Identity=32.0512820512821, Blast_Score=90, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 18117; Mature: 18117

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEIRGKKPEIGEKTFIAHSSDIIGDVTIGRDCGIWFGSVIRGDDNLIKIGNETNVQDN
CEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCEECEEEECCCCEEEECCCCCCCCC
AVLHVDKEHTIEIGSGVTIGHGAIIHGCKIEDECLIGMGAIILNGAKIGKNTMIAAGTLV
EEEEECCCCEEEECCCEEECCCEEEECCCCCCCCEEEECEEEEECCCCCCCEEEEEEEEE
SQNKEIPEGVLVMGVPGKVVRKLTEDEIESIKNSRREYVKMKNLYIK
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MLIEIRGKKPEIGEKTFIAHSSDIIGDVTIGRDCGIWFGSVIRGDDNLIKIGNETNVQDN
CEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCEECEEEECCCCEEEECCCCCCCCC
AVLHVDKEHTIEIGSGVTIGHGAIIHGCKIEDECLIGMGAIILNGAKIGKNTMIAAGTLV
EEEEECCCCEEEECCCEEECCCEEEECCCCCCCCEEEECEEEEECCCCCCCEEEEEEEEE
SQNKEIPEGVLVMGVPGKVVRKLTEDEIESIKNSRREYVKMKNLYIK
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]