| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310628
Identifier: 18310628
GI number: 18310628
Start: 1918849
End: 1919451
Strand: Reverse
Name: 18310628
Synonym: CPE1646
Alternate gene names: NA
Gene position: 1919451-1918849 (Counterclockwise)
Preceding gene: 18310629
Following gene: 18310627
Centisome position: 63.32
GC content: 26.53
Gene sequence:
>603_bases ATGGTGAGAGAAGTTATACTTGATATGAGTAACATAAATTTTAAAGGTAACACTTTAGATGTTGGTATAAATAACTATGG AATTATTTATAATATTTTAAAGCAAACAGAAAGTGAAATAAGTGTAGATTATTATGTTGAAAATTTTAATGGAGAATATA GAAATCAATATGATAATGGTGTGCTTTTCTTTTCTTTAAGTCAATTGCATAAAAATGAGGTTGAAGATGTTGTAAAAAAC ATATGGAGCAATGTAAGATTTGGAGGAAACTTATATATATGGGATAGAGAAAAGCAAAAAAAAGAAACTGTAAATGATAA GGTTAAAGTTTTAATGACGGGAAACAAAGAAAAAGAGTTTGAATTTATAGATAATAGTATTTCTAATGAGTTTACAGTAG ATAGCTCAAAAAAAATACTTGAAAAATATTTTGAAATAGAGGAAACTAAAGTTTGTGATAAAATAATATTTATCAAAGGA ATAAAGAGAGGAAGTATAAAGAATGAAAATACTGCTAACAGCAATAAACTCAAAGTACATTCACAGCAACCTAGCAGTGA GGTACCTGAAGGTATTTACAAAGGATTTAGATTTCCAAGGTGA
Upstream 100 bases:
>100_bases AAAATAAAATTATAAGAGTAATTTTTTCTAATAAGCATAGAAAGAATTACTCTTTAAATGTATAATAGAAATTAATATGG AATAAATTGGGGGTGATATT
Downstream 100 bases:
>100_bases TATAAAAGAATTTTCAATAAATGATAGAGTTGAGAATATTTTAGAAGGTATTATTGAGGAGAAACCAGATGTAGTGGCTT TCTCCTGTTACATATGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNGVLFFSLSQLHKNEVEDVVKN IWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEFEFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKG IKRGSIKNENTANSNKLKVHSQQPSSEVPEGIYKGFRFPR
Sequences:
>Translated_200_residues MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNGVLFFSLSQLHKNEVEDVVKN IWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEFEFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKG IKRGSIKNENTANSNKLKVHSQQPSSEVPEGIYKGFRFPR >Mature_200_residues MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNGVLFFSLSQLHKNEVEDVVKN IWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEFEFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKG IKRGSIKNENTANSNKLKVHSQQPSSEVPEGIYKGFRFPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23350; Mature: 23350
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNG CCHHHEEHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC VLFFSLSQLHKNEVEDVVKNIWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEF EEEEEHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCHHHHHHHCCEEEEEEECCCCCHH EFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKGIKRGSIKNENTANSNKLKVH HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEE SQQPSSEVPEGIYKGFRFPR CCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNG CCHHHEEHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC VLFFSLSQLHKNEVEDVVKNIWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEF EEEEEHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCHHHHHHHCCEEEEEEECCCCCHH EFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKGIKRGSIKNENTANSNKLKVH HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEE SQQPSSEVPEGIYKGFRFPR CCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA