Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310628

Identifier: 18310628

GI number: 18310628

Start: 1918849

End: 1919451

Strand: Reverse

Name: 18310628

Synonym: CPE1646

Alternate gene names: NA

Gene position: 1919451-1918849 (Counterclockwise)

Preceding gene: 18310629

Following gene: 18310627

Centisome position: 63.32

GC content: 26.53

Gene sequence:

>603_bases
ATGGTGAGAGAAGTTATACTTGATATGAGTAACATAAATTTTAAAGGTAACACTTTAGATGTTGGTATAAATAACTATGG
AATTATTTATAATATTTTAAAGCAAACAGAAAGTGAAATAAGTGTAGATTATTATGTTGAAAATTTTAATGGAGAATATA
GAAATCAATATGATAATGGTGTGCTTTTCTTTTCTTTAAGTCAATTGCATAAAAATGAGGTTGAAGATGTTGTAAAAAAC
ATATGGAGCAATGTAAGATTTGGAGGAAACTTATATATATGGGATAGAGAAAAGCAAAAAAAAGAAACTGTAAATGATAA
GGTTAAAGTTTTAATGACGGGAAACAAAGAAAAAGAGTTTGAATTTATAGATAATAGTATTTCTAATGAGTTTACAGTAG
ATAGCTCAAAAAAAATACTTGAAAAATATTTTGAAATAGAGGAAACTAAAGTTTGTGATAAAATAATATTTATCAAAGGA
ATAAAGAGAGGAAGTATAAAGAATGAAAATACTGCTAACAGCAATAAACTCAAAGTACATTCACAGCAACCTAGCAGTGA
GGTACCTGAAGGTATTTACAAAGGATTTAGATTTCCAAGGTGA

Upstream 100 bases:

>100_bases
AAAATAAAATTATAAGAGTAATTTTTTCTAATAAGCATAGAAAGAATTACTCTTTAAATGTATAATAGAAATTAATATGG
AATAAATTGGGGGTGATATT

Downstream 100 bases:

>100_bases
TATAAAAGAATTTTCAATAAATGATAGAGTTGAGAATATTTTAGAAGGTATTATTGAGGAGAAACCAGATGTAGTGGCTT
TCTCCTGTTACATATGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNGVLFFSLSQLHKNEVEDVVKN
IWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEFEFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKG
IKRGSIKNENTANSNKLKVHSQQPSSEVPEGIYKGFRFPR

Sequences:

>Translated_200_residues
MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNGVLFFSLSQLHKNEVEDVVKN
IWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEFEFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKG
IKRGSIKNENTANSNKLKVHSQQPSSEVPEGIYKGFRFPR
>Mature_200_residues
MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNGVLFFSLSQLHKNEVEDVVKN
IWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEFEFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKG
IKRGSIKNENTANSNKLKVHSQQPSSEVPEGIYKGFRFPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23350; Mature: 23350

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNG
CCHHHEEHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
VLFFSLSQLHKNEVEDVVKNIWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEF
EEEEEHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCHHHHHHHCCEEEEEEECCCCCHH
EFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKGIKRGSIKNENTANSNKLKVH
HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEE
SQQPSSEVPEGIYKGFRFPR
CCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MVREVILDMSNINFKGNTLDVGINNYGIIYNILKQTESEISVDYYVENFNGEYRNQYDNG
CCHHHEEHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
VLFFSLSQLHKNEVEDVVKNIWSNVRFGGNLYIWDREKQKKETVNDKVKVLMTGNKEKEF
EEEEEHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCHHHHHHHCCEEEEEEECCCCCHH
EFIDNSISNEFTVDSSKKILEKYFEIEETKVCDKIIFIKGIKRGSIKNENTANSNKLKVH
HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEE
SQQPSSEVPEGIYKGFRFPR
CCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA