| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ntpE
Identifier: 18310623
GI number: 18310623
Start: 1913558
End: 1914154
Strand: Reverse
Name: ntpE
Synonym: CPE1641
Alternate gene names: 18310623
Gene position: 1914154-1913558 (Counterclockwise)
Preceding gene: 18310624
Following gene: 18310622
Centisome position: 63.14
GC content: 26.13
Gene sequence:
>597_bases ATGTCAAATTTAAATAATTTAACTTCCAAGATTCTAAATGATGCTGAAGAAAAGAAAAAGTATATATTAGCTGACGCTGA AGCCCAAAAAGATAAAATAATATCTAAGAAAACTAATAGAGCTGAAGCAGATAAAGAAGAAATAATAACTAAAGCTAATA TAGAAGCAGAAGTTAAAAAGGCAAGAATAATTTCAAATGCTAAATTATCAGTAAGAAATGATATGTTAAGAGCTAAGCAA GACGTTATATCAAAAGTATTTAACGAAGCTATAGAAAAGTTACAAAATCTTTCTAACGGAGATTATAAATACTATGTTAT CTCAACTTTAGATTCTTTAGAGTTAGAAGGAACAGAAGTTATTATAATCAATGAAAAAGATAAAGATATATTTAGCAATG AGTTCTTGGAAGCATTAAATAAAGAACTTGAATCTAAAGGAAAAAAAGGAAGTATTACATTAAATATGGAAGGCAAATTT AATGGTGGCTTCATATTAGATAGAAATGGAATACAAATAAATAATACCTTTGAAGCTTTAATTAACTCTTTAAGAGGAGA GTTAGAGTTTGAGGTGAACAAAGTATTATTTGATTAA
Upstream 100 bases:
>100_bases TGAAACATATGCATTATTAGGATTCGTTATATCATTCTTATTAGTAAATGGTGCAAGCGTAATACAATAATAGTAAGCAA AGATTGGAGAAGTGAAGGGA
Downstream 100 bases:
>100_bases GGAGGATGAAGAATGGATTCAATGCAATTTTTGCAATTAATTCCTAGAATCAGAGTATACGAAAAGAAACTCCTTGATAA AGCTCAAATAGAAAGAATGA
Product: V-type ATPase, E subunit
Products: ADP; phosphate; H+
Alternate protein names: V-ATPase subunit E
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQ DVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKF NGGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD
Sequences:
>Translated_198_residues MSNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQ DVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKF NGGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD >Mature_197_residues SNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQD VISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFN GGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD
Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane
COG id: COG1390
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the V-ATPase E subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): VATE_CLOP1 (Q0TPW4)
Other databases:
- EMBL: CP000246 - RefSeq: YP_696326.1 - ProteinModelPortal: Q0TPW4 - SMR: Q0TPW4 - STRING: Q0TPW4 - GeneID: 4201242 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_1893 - TIGR: CPF_1893 - eggNOG: COG1390 - HOGENOM: HBG727462 - OMA: IDDSTLW - ProtClustDB: CLSK899372 - BioCyc: CPER195103:CPF_1893-MONOMER - HAMAP: MF_00311 - InterPro: IPR002842
Pfam domain/function: PF01991 vATP-synt_E
EC number: 3.6.3.14
Molecular weight: Translated: 22424; Mature: 22293
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKK CCCHHHHHHHHHCCHHHHHHEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH ARIISNAKLSVRNDMLRAKQDVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCEE IIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFNGGFILDRNGIQINNTFEAL EEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCEEECCHHHHH INSLRGELEFEVNKVLFD HHHHCCCEEEEHHEEECC >Mature Secondary Structure SNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKK CCHHHHHHHHHCCHHHHHHEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH ARIISNAKLSVRNDMLRAKQDVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCEE IIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFNGGFILDRNGIQINNTFEAL EEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCEEECCHHHHH INSLRGELEFEVNKVLFD HHHHCCCEEEEHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA