| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310602
Identifier: 18310602
GI number: 18310602
Start: 1890116
End: 1890586
Strand: Direct
Name: 18310602
Synonym: CPE1620
Alternate gene names: NA
Gene position: 1890116-1890586 (Clockwise)
Preceding gene: 18310598
Following gene: 18310605
Centisome position: 62.35
GC content: 29.3
Gene sequence:
>471_bases ATGGAAAAAATTACAGATAGAACTCCTAGTGAAGCTTTAAACGATAATCTTAAAGGGCTTTATATGGGAATGGATATTTT TAAACGTTACGAAAAAAAATGTAAGTCTAATGACTTAAAAAATTTACTAAATGATGTTATAAACCTTTACTCTAAGGAAG CCTGTGAACTTTCAAGTAAAATATCTGCTCTTGGTGACTCACCAGCTTCAAATGTTGGCATTCTAGGAAAAGCTTCTGAG GCTATTTACAATATAAAAACTGTTACAGCTGATACAGATAGTGAAATTCTAGAAGAAAGCATAAAAGCTTTTAAGACAGG TATAATTATGTTTCAAAAGTTTTTACATGAAAAAGAAGATCAATTAGACGAAGAATCAATTGACCTAGTAAAAAATATGA TACAAGAAAATGAAGAGCTTAGTAAAAAATTAAATGAGTATTCAAGCCCTCATCAAGCTAACTTTTTCTAA
Upstream 100 bases:
>100_bases TATTTTAAAATATTAATATGAAACTAAGAATTTCTTATTTAAAATAAATTTTTCTAATTATTTTTTTATAAAAGGACAAA ATAAAGTAGAGGTGATATTC
Downstream 100 bases:
>100_bases ATAAACTAGGCTATATAAATAGCCTATAAATTAAAGCTTATAAGTTGTTTATTAAACTATTTATAAGTTTTATTTTAAGC TTTTATATAGCCCACTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MEKITDRTPSEALNDNLKGLYMGMDIFKRYEKKCKSNDLKNLLNDVINLYSKEACELSSKISALGDSPASNVGILGKASE AIYNIKTVTADTDSEILEESIKAFKTGIIMFQKFLHEKEDQLDEESIDLVKNMIQENEELSKKLNEYSSPHQANFF
Sequences:
>Translated_156_residues MEKITDRTPSEALNDNLKGLYMGMDIFKRYEKKCKSNDLKNLLNDVINLYSKEACELSSKISALGDSPASNVGILGKASE AIYNIKTVTADTDSEILEESIKAFKTGIIMFQKFLHEKEDQLDEESIDLVKNMIQENEELSKKLNEYSSPHQANFF >Mature_156_residues MEKITDRTPSEALNDNLKGLYMGMDIFKRYEKKCKSNDLKNLLNDVINLYSKEACELSSKISALGDSPASNVGILGKASE AIYNIKTVTADTDSEILEESIKAFKTGIIMFQKFLHEKEDQLDEESIDLVKNMIQENEELSKKLNEYSSPHQANFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17680; Mature: 17680
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKITDRTPSEALNDNLKGLYMGMDIFKRYEKKCKSNDLKNLLNDVINLYSKEACELSSK CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISALGDSPASNVGILGKASEAIYNIKTVTADTDSEILEESIKAFKTGIIMFQKFLHEKED HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDEESIDLVKNMIQENEELSKKLNEYSSPHQANFF HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEKITDRTPSEALNDNLKGLYMGMDIFKRYEKKCKSNDLKNLLNDVINLYSKEACELSSK CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISALGDSPASNVGILGKASEAIYNIKTVTADTDSEILEESIKAFKTGIIMFQKFLHEKED HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDEESIDLVKNMIQENEELSKKLNEYSSPHQANFF HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA