| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310587
Identifier: 18310587
GI number: 18310587
Start: 1878452
End: 1879261
Strand: Reverse
Name: 18310587
Synonym: CPE1605
Alternate gene names: NA
Gene position: 1879261-1878452 (Counterclockwise)
Preceding gene: 18310588
Following gene: 18310586
Centisome position: 61.99
GC content: 25.31
Gene sequence:
>810_bases ATGAGAAGTTTAAATAAAGAAGTTTTTCTTCAAAAATATCCTCACGTAGAAGAACACATAGAAAAAAATAAAATTAAATT TGAAGATTTAGAGAGAATATATAATGATTTTGTAAAGTTTGAGGGGTCTTATTATAATCAAGCTGATTTTATAGCAAATA TACTTCGTTCTAATGAAAATGTTCATTCTGTTAAATCAAGGATAAAAAATCCAGATAGATTAATAGAAAAAATAATACGA AAAACAGAAGATAGAAAAGAAAAATATGGTGAGGATTTTTACTTTAATGAGTATAACTATAAAAATGAAATAACTGATTT AATAGGAATAAGAGTTTTACATATATTTAAGGATCAATGGAAGGATATACATGATTTCATAATAAAGACTTGGAATGTAA TTGAAATAACAGCAAATATAAGAGATGGAGATGATAGAAGTATATTTGATAATCTAGGTATTGAAGTTATATCAAGACAA TCAGGATATAGATCAGTTCATTATTTAGTTGAACTAAATTTTACACAAGATAGTACAACAATAGCTGAGATACAAGTAAG GACTATTTTTGAAGAGGGATATGGAGAAATTGATCATAGACTAAGATATTCCCATCAAGAGATACCAGAGATATTAAAAT CTAATCTTTTGCTTTTTAACAGAATTGTAGGAAGTGCAGATGAAATGGCTTCTTTAATAAATATGCTAAATAATAATTTA GATGATAAAGACCATTATTATGAAAGTAAGCTAAAAGAAAAAGATGAAGAAATAAGGAAATTAAAGGAACAAATTGAGCA GTTAAAATAG
Upstream 100 bases:
>100_bases GGAAATTGATTTAGGTTTAGAAGATTTAAAGAGGTTAATAGAGAAATAGAGCTTATAGTGTATTACATACAACAATAAAT TAAAACAAGGGGAGATAGTT
Downstream 100 bases:
>100_bases CTAAAATGGGTTATATCAAAATAATTGGTGAATAAAATTTACAAATGTTGAGTAAGACACTATTTATAGGTTTTATACTT TTATTTTGATATAGCCCTTA
Product: GTP pyrophosphokinase-like protein
Products: NA
Alternate protein names: RelA/SpoT Domain-Containing Protein; RelA/SpoT Domain Protein; GTP Pyrophosphokinase-Like Protein; RelA / SpoT Related Protein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRSLNKEVFLQKYPHVEEHIEKNKIKFEDLERIYNDFVKFEGSYYNQADFIANILRSNENVHSVKSRIKNPDRLIEKIIR KTEDRKEKYGEDFYFNEYNYKNEITDLIGIRVLHIFKDQWKDIHDFIIKTWNVIEITANIRDGDDRSIFDNLGIEVISRQ SGYRSVHYLVELNFTQDSTTIAEIQVRTIFEEGYGEIDHRLRYSHQEIPEILKSNLLLFNRIVGSADEMASLINMLNNNL DDKDHYYESKLKEKDEEIRKLKEQIEQLK
Sequences:
>Translated_269_residues MRSLNKEVFLQKYPHVEEHIEKNKIKFEDLERIYNDFVKFEGSYYNQADFIANILRSNENVHSVKSRIKNPDRLIEKIIR KTEDRKEKYGEDFYFNEYNYKNEITDLIGIRVLHIFKDQWKDIHDFIIKTWNVIEITANIRDGDDRSIFDNLGIEVISRQ SGYRSVHYLVELNFTQDSTTIAEIQVRTIFEEGYGEIDHRLRYSHQEIPEILKSNLLLFNRIVGSADEMASLINMLNNNL DDKDHYYESKLKEKDEEIRKLKEQIEQLK >Mature_269_residues MRSLNKEVFLQKYPHVEEHIEKNKIKFEDLERIYNDFVKFEGSYYNQADFIANILRSNENVHSVKSRIKNPDRLIEKIIR KTEDRKEKYGEDFYFNEYNYKNEITDLIGIRVLHIFKDQWKDIHDFIIKTWNVIEITANIRDGDDRSIFDNLGIEVISRQ SGYRSVHYLVELNFTQDSTTIAEIQVRTIFEEGYGEIDHRLRYSHQEIPEILKSNLLLFNRIVGSADEMASLINMLNNNL DDKDHYYESKLKEKDEEIRKLKEQIEQLK
Specific function: Unknown
COG id: COG2357
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32321; Mature: 32321
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLNKEVFLQKYPHVEEHIEKNKIKFEDLERIYNDFVKFEGSYYNQADFIANILRSNEN CCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH VHSVKSRIKNPDRLIEKIIRKTEDRKEKYGEDFYFNEYNYKNEITDLIGIRVLHIFKDQW HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KDIHDFIIKTWNVIEITANIRDGDDRSIFDNLGIEVISRQSGYRSVHYLVELNFTQDSTT HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCHHHHHCCCCCCEEEEEEEEEECCCCCH IAEIQVRTIFEEGYGEIDHRLRYSHQEIPEILKSNLLLFNRIVGSADEMASLINMLNNNL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC DDKDHYYESKLKEKDEEIRKLKEQIEQLK CCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSLNKEVFLQKYPHVEEHIEKNKIKFEDLERIYNDFVKFEGSYYNQADFIANILRSNEN CCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH VHSVKSRIKNPDRLIEKIIRKTEDRKEKYGEDFYFNEYNYKNEITDLIGIRVLHIFKDQW HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KDIHDFIIKTWNVIEITANIRDGDDRSIFDNLGIEVISRQSGYRSVHYLVELNFTQDSTT HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCHHHHHCCCCCCEEEEEEEEEECCCCCH IAEIQVRTIFEEGYGEIDHRLRYSHQEIPEILKSNLLLFNRIVGSADEMASLINMLNNNL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC DDKDHYYESKLKEKDEEIRKLKEQIEQLK CCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA