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The map label for this gene is ybaF [H]

Identifier: 18310564

GI number: 18310564

Start: 1853950

End: 1854771

Strand: Reverse

Name: ybaF [H]

Synonym: CPE1582

Alternate gene names: 18310564

Gene position: 1854771-1853950 (Counterclockwise)

Preceding gene: 18310565

Following gene: 18310563

Centisome position: 61.18

GC content: 25.55

Gene sequence:

>822_bases
ATGCTTACATATATAAAAAAGGATTCTCCTATTGATAAACTTACTGGAGCAACTAAGCTTATTTGCTTTATATTTTGGAC
ATTAGCTGCCATGCTTACATATGATACAAGAGTATTAATTGGCATGCTTATATTTAGTTTAATTATATTTAAAGTCTCAA
AAATAGAGTTTAAAGAAGTTTCTTTTATAGTTTATTTTATATTATTCTTTTTACTTTTAAATGATTTAGCCATTTTTATA
TTTTCACCTTATGAAGGGGTTAATATATATGGAACAAGACATGATATATTTCATATAGTTGGGCCATATACACTAACATG
GGAACAATTATTTTATGAGTTTAACGTTACATTAAAATATTTATCAGTTATACCTATGGCACTTTTATTTATACTTGCAA
CAAATCCAAGTGAGTTTGCTGCATCTTTAAATAAAATAGGTGTTAGTTATAAAATATCATATTCTGTATCAATAGCTTTA
AGATACATACCAGATATTCAAAGGGAGTATCATGATATATCCTTTGCTCAACAAGCAAGAGGAATTGATATGTCTAAAAA
AGAAAAGTTAGGAAAAAGAATAAAAAATATATCTTCAGTTTTAATGCCACTTATTTTTTCAAGTTTAGATAGAATAGAAA
ATATAAGTACAGCAATGGAGCTTAGAGCCTTTGGAAAGAATAAAAAAAGAACTTGGTATAATGAAAGAAAATTTTCTAAG
GGTGATTACTTAGCTATTATTGTAGTTATCTTAATATTTGCTTTATCATTATACTTTACATTTAATAATGGAAGTAGATT
TTATAATCCCTTTGTAAAATAG

Upstream 100 bases:

>100_bases
CATTATATGATTTAGCCTTGAAATTTAAGTTGGAAGACCCTAAGGATTTTGTTTGTAAATTTATTGATTTCGACAGGGGG
GCAAGAAATTAGTGGATGCA

Downstream 100 bases:

>100_bases
TAAATAAAAATATAATTTAATAGTGAATATAAAGCTTATAAACATATTCCGAGAATTACTAGATTTCGTTAAGAATTTAT
AATTATTACTCCGAAGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLTYIKKDSPIDKLTGATKLICFIFWTLAAMLTYDTRVLIGMLIFSLIIFKVSKIEFKEVSFIVYFILFFLLLNDLAIFI
FSPYEGVNIYGTRHDIFHIVGPYTLTWEQLFYEFNVTLKYLSVIPMALLFILATNPSEFAASLNKIGVSYKISYSVSIAL
RYIPDIQREYHDISFAQQARGIDMSKKEKLGKRIKNISSVLMPLIFSSLDRIENISTAMELRAFGKNKKRTWYNERKFSK
GDYLAIIVVILIFALSLYFTFNNGSRFYNPFVK

Sequences:

>Translated_273_residues
MLTYIKKDSPIDKLTGATKLICFIFWTLAAMLTYDTRVLIGMLIFSLIIFKVSKIEFKEVSFIVYFILFFLLLNDLAIFI
FSPYEGVNIYGTRHDIFHIVGPYTLTWEQLFYEFNVTLKYLSVIPMALLFILATNPSEFAASLNKIGVSYKISYSVSIAL
RYIPDIQREYHDISFAQQARGIDMSKKEKLGKRIKNISSVLMPLIFSSLDRIENISTAMELRAFGKNKKRTWYNERKFSK
GDYLAIIVVILIFALSLYFTFNNGSRFYNPFVK
>Mature_273_residues
MLTYIKKDSPIDKLTGATKLICFIFWTLAAMLTYDTRVLIGMLIFSLIIFKVSKIEFKEVSFIVYFILFFLLLNDLAIFI
FSPYEGVNIYGTRHDIFHIVGPYTLTWEQLFYEFNVTLKYLSVIPMALLFILATNPSEFAASLNKIGVSYKISYSVSIAL
RYIPDIQREYHDISFAQQARGIDMSKKEKLGKRIKNISSVLMPLIFSSLDRIENISTAMELRAFGKNKKRTWYNERKFSK
GDYLAIIVVILIFALSLYFTFNNGSRFYNPFVK

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 31708; Mature: 31708

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYIKKDSPIDKLTGATKLICFIFWTLAAMLTYDTRVLIGMLIFSLIIFKVSKIEFKEV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SFIVYFILFFLLLNDLAIFIFSPYEGVNIYGTRHDIFHIVGPYTLTWEQLFYEFNVTLKY
HHHHHHHHHHHHHHHHHEEEECCCCCCEEEECHHHHEEEECCCEEHHHHHHHHHHHHHHH
LSVIPMALLFILATNPSEFAASLNKIGVSYKISYSVSIALRYIPDIQREYHDISFAQQAR
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEEEHHHHCCHHHHHHHHHHHHHHHC
GIDMSKKEKLGKRIKNISSVLMPLIFSSLDRIENISTAMELRAFGKNKKRTWYNERKFSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
GDYLAIIVVILIFALSLYFTFNNGSRFYNPFVK
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MLTYIKKDSPIDKLTGATKLICFIFWTLAAMLTYDTRVLIGMLIFSLIIFKVSKIEFKEV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SFIVYFILFFLLLNDLAIFIFSPYEGVNIYGTRHDIFHIVGPYTLTWEQLFYEFNVTLKY
HHHHHHHHHHHHHHHHHEEEECCCCCCEEEECHHHHEEEECCCEEHHHHHHHHHHHHHHH
LSVIPMALLFILATNPSEFAASLNKIGVSYKISYSVSIALRYIPDIQREYHDISFAQQAR
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEEEHHHHCCHHHHHHHHHHHHHHHC
GIDMSKKEKLGKRIKNISSVLMPLIFSSLDRIENISTAMELRAFGKNKKRTWYNERKFSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
GDYLAIIVVILIFALSLYFTFNNGSRFYNPFVK
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]