| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310563
Identifier: 18310563
GI number: 18310563
Start: 1852647
End: 1853468
Strand: Reverse
Name: 18310563
Synonym: CPE1581
Alternate gene names: NA
Gene position: 1853468-1852647 (Counterclockwise)
Preceding gene: 18310564
Following gene: 18310562
Centisome position: 61.14
GC content: 27.13
Gene sequence:
>822_bases ATGTATGATAGTCAGAAAGAAGAGAAAAAATTAAAGAGAAAATTGTTTTTTAAATTCTTTAACTACAATTTCTTAAAGGA TAGAAATATAGAATATAAAGAGTTTAGATATGGTGATAATAAAAGAGATTACTATAGAGTATATAAAGGCTATGATAAAA GAAAGCCTACCATATTCTTTATATATAGTGGAGGTTTATGGAAGGGAAGCCCTAAAGGGTGTGCAGCTATAGGGAAGTTT TTCTATAAATATGGATTTACTGTAGTAATTCCATCCTATGAGTTAGCGCCAGAACATAAATATCCAGTTCAAATGGGAAA TATATTTTCAGCATTTAAACACTATGTAGAAAATAATAAGCCTAATAGAATAGTAGTTATGGGATATTCTTCAGGGGCAG ATTTAGCTGCAAACTTAGTTTACAATGAAGACATGAAAGAAAAATTCAATATAGATACAAGCATAATATCTTCTTTTATA ACACTAGGAGGAACCTTAGATTTTAGCCAATGTAATTCTAAAGAATATGAAAAGTATATAAAAAAATATTTATACGGAAA AGAACAGATTTTTGATGTTAATCCAATAAATTTACTAAAGGAAGATTCGCCTAAAATTCCAGTACTGTGCGTTCATGGAG CTAGGGATTCTATAGTAAGTTATGAAAATTCTAAAAGATTTGTAGAAAAGGTAAATAAATTTAAAGGAAATGGACAATTT TTAAAATTAGAAGGATATCAACATTTAGATTTGTTAAATTTATTTATAGGAGTAGGCAATGAAAAAACTGGAGATATAAT GAGTTTTATTAATAGATTTTAA
Upstream 100 bases:
>100_bases TTAATAAATTTTAAACAAAGTGTTGAAATTGTTAATAAATATAAGGTATATTTGTATGTGAGAAATTTAAATGTAATTTT AAAGTTTAAGGAGATTATAA
Downstream 100 bases:
>100_bases TTTGTTTAGATCATAGTAATTTTACTATGATCTTTTTTATTTAAGATTAAAAATTCTTTGAATATTAATTTAGACCAAGT ACTAATGGAAAGTAAATTTA
Product: lipase
Products: NA
Alternate protein names: Lipase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MYDSQKEEKKLKRKLFFKFFNYNFLKDRNIEYKEFRYGDNKRDYYRVYKGYDKRKPTIFFIYSGGLWKGSPKGCAAIGKF FYKYGFTVVIPSYELAPEHKYPVQMGNIFSAFKHYVENNKPNRIVVMGYSSGADLAANLVYNEDMKEKFNIDTSIISSFI TLGGTLDFSQCNSKEYEKYIKKYLYGKEQIFDVNPINLLKEDSPKIPVLCVHGARDSIVSYENSKRFVEKVNKFKGNGQF LKLEGYQHLDLLNLFIGVGNEKTGDIMSFINRF
Sequences:
>Translated_273_residues MYDSQKEEKKLKRKLFFKFFNYNFLKDRNIEYKEFRYGDNKRDYYRVYKGYDKRKPTIFFIYSGGLWKGSPKGCAAIGKF FYKYGFTVVIPSYELAPEHKYPVQMGNIFSAFKHYVENNKPNRIVVMGYSSGADLAANLVYNEDMKEKFNIDTSIISSFI TLGGTLDFSQCNSKEYEKYIKKYLYGKEQIFDVNPINLLKEDSPKIPVLCVHGARDSIVSYENSKRFVEKVNKFKGNGQF LKLEGYQHLDLLNLFIGVGNEKTGDIMSFINRF >Mature_273_residues MYDSQKEEKKLKRKLFFKFFNYNFLKDRNIEYKEFRYGDNKRDYYRVYKGYDKRKPTIFFIYSGGLWKGSPKGCAAIGKF FYKYGFTVVIPSYELAPEHKYPVQMGNIFSAFKHYVENNKPNRIVVMGYSSGADLAANLVYNEDMKEKFNIDTSIISSFI TLGGTLDFSQCNSKEYEKYIKKYLYGKEQIFDVNPINLLKEDSPKIPVLCVHGARDSIVSYENSKRFVEKVNKFKGNGQF LKLEGYQHLDLLNLFIGVGNEKTGDIMSFINRF
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31985; Mature: 31985
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDSQKEEKKLKRKLFFKFFNYNFLKDRNIEYKEFRYGDNKRDYYRVYKGYDKRKPTIFF CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHEECCCCCHHHHHHHCCCCCCCCEEEE IYSGGLWKGSPKGCAAIGKFFYKYGFTVVIPSYELAPEHKYPVQMGNIFSAFKHYVENNK EECCCEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC PNRIVVMGYSSGADLAANLVYNEDMKEKFNIDTSIISSFITLGGTLDFSQCNSKEYEKYI CCEEEEEEECCCCCHHHHEEECCCHHHHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHH KKYLYGKEQIFDVNPINLLKEDSPKIPVLCVHGARDSIVSYENSKRFVEKVNKFKGNGQF HHHHCCCHHEECCCCHHHHCCCCCCCCEEEEECCCCCHHCCCHHHHHHHHHHHCCCCCCE LKLEGYQHLDLLNLFIGVGNEKTGDIMSFINRF EEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MYDSQKEEKKLKRKLFFKFFNYNFLKDRNIEYKEFRYGDNKRDYYRVYKGYDKRKPTIFF CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHEECCCCCHHHHHHHCCCCCCCCEEEE IYSGGLWKGSPKGCAAIGKFFYKYGFTVVIPSYELAPEHKYPVQMGNIFSAFKHYVENNK EECCCEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC PNRIVVMGYSSGADLAANLVYNEDMKEKFNIDTSIISSFITLGGTLDFSQCNSKEYEKYI CCEEEEEEECCCCCHHHHEEECCCHHHHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHH KKYLYGKEQIFDVNPINLLKEDSPKIPVLCVHGARDSIVSYENSKRFVEKVNKFKGNGQF HHHHCCCHHEECCCCHHHHCCCCCCCCEEEEECCCCCHHCCCHHHHHHHHHHHCCCCCCE LKLEGYQHLDLLNLFIGVGNEKTGDIMSFINRF EEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA