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The map label for this gene is yufP [H]

Identifier: 18310560

GI number: 18310560

Start: 1848218

End: 1849315

Strand: Reverse

Name: yufP [H]

Synonym: CPE1578

Alternate gene names: 18310560

Gene position: 1849315-1848218 (Counterclockwise)

Preceding gene: 18310561

Following gene: 18310559

Centisome position: 61.0

GC content: 32.79

Gene sequence:

>1098_bases
ATGAAGTTTAAACAGTTTATTATATCTTTAATGGCTATTATATTAGGACTTATTGCTGGTGCTATTTTAATGGCTATTAT
GGGTCACAATCCAATAGATGGTTATTCTTTCTTATTCAAAGGTGGACTTATGAACATAGAAAGAATAGGAAATACTTTAG
CTACGGCTACTCCTTTAATATTAACAGGACTTTCCTTAGCCTTTGCATTTAAAACTGGACTATTTAATATTGGTGCTCCA
GGACAAATGCTTATGGGTGGATTTTTTGCTACAGCAGTAGGATTAACAGTGAAATTACCAGCTCCAGTCTTAATACCATT
AATGATTCTTGCTGGTATTCTTGGAGGAGCTATATGGGCATTTATTCCTGGTGTTTTAAAAGCTAAGTTTAATGTTCATG
AGGTTGTTTCAACAATAATGATGAACTGGATAGCATATTGGATAGTGTATTACATGGTTCCTATGTACTTTAAAGGAGAA
TTCTTAGAAACTGAATCAGCACAGCTTCCAGCGGCAGCTACTTTAAGAATACAAGCACTTACAGACTTTTTCCAAGGATC
ATTTATAAATATAGGAATATTAATTGCACTTATTTCTGTATTTGCAGTTTGGTTTATATTAAATAAAACAGTTTTAGGAT
ATGAATTAAAGGCTGTTGGATTTAATAGAGATGCTGCAGAATATGCAGGTATTTCAGTAAATAGAAATATATTATTATCA
ATGATGATAGCTGGTGCTTTAGCAGGGCTTGCAGGTGTTGTTCAATACACAGGAAATGCTGTGAGCATACAAATAGGTGT
TATGCCTACACAAGGATTTGATGGTATCGCAGTAGCTTTACTTGGTGCAAATACTCCTATAGGAGTTTTATTCTCAGCTT
TATTCTTTGGTCTTCTATATACAGGAAAAGGATTTATGAATGCTATGACAAGCATACCTCCAGAAATAGCAGATACTATA
ATGGCTACAATAATATATTTCTCTGCTACAAGTGTAATAATGGAGAGAGTGCTTAATAAATTCCAAAAAAGAAAGAAAGA
TAAATTAAATAAAAATACTAATCAAGAAACAACTAAAGAAAGGGTGGTGAGCAAATAA

Upstream 100 bases:

>100_bases
ATAATAAATAACGGAGAACTTATAGGTGTTGTAAATGCAGATGAAACTAATGAAAATGAAGTAGGTCTTATGATGGCTGG
TATAAAAGGAGGAGAAAAGC

Downstream 100 bases:

>100_bases
TGTGGGAAACAATTCAACAAATATTTCCTTATGCAATAGCTTTTACTATACCTCTTTTAATAACCGCATTAGGTGCTTTA
TTTTCTGAAAGAAGCGGTGT

Product: ABC transporter

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKFKQFIISLMAIILGLIAGAILMAIMGHNPIDGYSFLFKGGLMNIERIGNTLATATPLILTGLSLAFAFKTGLFNIGAP
GQMLMGGFFATAVGLTVKLPAPVLIPLMILAGILGGAIWAFIPGVLKAKFNVHEVVSTIMMNWIAYWIVYYMVPMYFKGE
FLETESAQLPAAATLRIQALTDFFQGSFINIGILIALISVFAVWFILNKTVLGYELKAVGFNRDAAEYAGISVNRNILLS
MMIAGALAGLAGVVQYTGNAVSIQIGVMPTQGFDGIAVALLGANTPIGVLFSALFFGLLYTGKGFMNAMTSIPPEIADTI
MATIIYFSATSVIMERVLNKFQKRKKDKLNKNTNQETTKERVVSK

Sequences:

>Translated_365_residues
MKFKQFIISLMAIILGLIAGAILMAIMGHNPIDGYSFLFKGGLMNIERIGNTLATATPLILTGLSLAFAFKTGLFNIGAP
GQMLMGGFFATAVGLTVKLPAPVLIPLMILAGILGGAIWAFIPGVLKAKFNVHEVVSTIMMNWIAYWIVYYMVPMYFKGE
FLETESAQLPAAATLRIQALTDFFQGSFINIGILIALISVFAVWFILNKTVLGYELKAVGFNRDAAEYAGISVNRNILLS
MMIAGALAGLAGVVQYTGNAVSIQIGVMPTQGFDGIAVALLGANTPIGVLFSALFFGLLYTGKGFMNAMTSIPPEIADTI
MATIIYFSATSVIMERVLNKFQKRKKDKLNKNTNQETTKERVVSK
>Mature_365_residues
MKFKQFIISLMAIILGLIAGAILMAIMGHNPIDGYSFLFKGGLMNIERIGNTLATATPLILTGLSLAFAFKTGLFNIGAP
GQMLMGGFFATAVGLTVKLPAPVLIPLMILAGILGGAIWAFIPGVLKAKFNVHEVVSTIMMNWIAYWIVYYMVPMYFKGE
FLETESAQLPAAATLRIQALTDFFQGSFINIGILIALISVFAVWFILNKTVLGYELKAVGFNRDAAEYAGISVNRNILLS
MMIAGALAGLAGVVQYTGNAVSIQIGVMPTQGFDGIAVALLGANTPIGVLFSALFFGLLYTGKGFMNAMTSIPPEIADTI
MATIIYFSATSVIMERVLNKFQKRKKDKLNKNTNQETTKERVVSK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39371; Mature: 39371

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKQFIISLMAIILGLIAGAILMAIMGHNPIDGYSFLFKGGLMNIERIGNTLATATPLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHCCHHHHHHHHH
LTGLSLAFAFKTGLFNIGAPGQMLMGGFFATAVGLTVKLPAPVLIPLMILAGILGGAIWA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHH
FIPGVLKAKFNVHEVVSTIMMNWIAYWIVYYMVPMYFKGEFLETESAQLPAAATLRIQAL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
TDFFQGSFINIGILIALISVFAVWFILNKTVLGYELKAVGFNRDAAEYAGISVNRNILLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHCCCCCCHHHHHH
MMIAGALAGLAGVVQYTGNAVSIQIGVMPTQGFDGIAVALLGANTPIGVLFSALFFGLLY
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
TGKGFMNAMTSIPPEIADTIMATIIYFSATSVIMERVLNKFQKRKKDKLNKNTNQETTKE
HCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RVVSK
HHCCC
>Mature Secondary Structure
MKFKQFIISLMAIILGLIAGAILMAIMGHNPIDGYSFLFKGGLMNIERIGNTLATATPLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHCCHHHHHHHHH
LTGLSLAFAFKTGLFNIGAPGQMLMGGFFATAVGLTVKLPAPVLIPLMILAGILGGAIWA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHH
FIPGVLKAKFNVHEVVSTIMMNWIAYWIVYYMVPMYFKGEFLETESAQLPAAATLRIQAL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
TDFFQGSFINIGILIALISVFAVWFILNKTVLGYELKAVGFNRDAAEYAGISVNRNILLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHCCCCCCHHHHHH
MMIAGALAGLAGVVQYTGNAVSIQIGVMPTQGFDGIAVALLGANTPIGVLFSALFFGLLY
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
TGKGFMNAMTSIPPEIADTIMATIIYFSATSVIMERVLNKFQKRKKDKLNKNTNQETTKE
HCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RVVSK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]