Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310558

Identifier: 18310558

GI number: 18310558

Start: 1846695

End: 1847063

Strand: Reverse

Name: 18310558

Synonym: CPE1576

Alternate gene names: NA

Gene position: 1847063-1846695 (Counterclockwise)

Preceding gene: 18310559

Following gene: 18310557

Centisome position: 60.93

GC content: 28.73

Gene sequence:

>369_bases
ATGTTAGCTAAAGACTTTTTGGATTTTAAAAATTGGTGTGTTGTTGGTGATGTAGGAAATGAAAAAAAGTATGCATATAG
AATTTTAAATAAGCTTAAAGAAAATGGATATAATGCTTTTGGAGTTAGCTTAAAAGATGGAGAAAACATATTTAAAAGAT
TAAAAGAAGTTCCTTGTAATATTGAGGTTATAGATCTATGTATAAACCCTATTAAGGGAATAGAATTTATTAAAGAGGCC
AAAACTTTAGGAATAAATAAGGTTTTAATTCAACCAGGTGCTGAAAGCGAAGAAGTTTTAAATTTTTGTAAGGAGAATGG
TATCTGTGCTATAGAAGGATGTGCACTAGTTGAACTAAGTAGAAGGTAA

Upstream 100 bases:

>100_bases
TAAAATTGTAAAAACAAGATTAATTTATTTTATATACTTTATATTTTAAAGATAATTAGACATAATAGAGTTAAATAAAG
TTTAAATGGAGGAATGAATT

Downstream 100 bases:

>100_bases
TATTTAAAAAGTTCGCATGTTTAATAAAAAAGTATTTATTGAATAGGTTTAAATTATAAAAATATGTTTTTATGCGTATT
ATATAGAGATAAAAAGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MLAKDFLDFKNWCVVGDVGNEKKYAYRILNKLKENGYNAFGVSLKDGENIFKRLKEVPCNIEVIDLCINPIKGIEFIKEA
KTLGINKVLIQPGAESEEVLNFCKENGICAIEGCALVELSRR

Sequences:

>Translated_122_residues
MLAKDFLDFKNWCVVGDVGNEKKYAYRILNKLKENGYNAFGVSLKDGENIFKRLKEVPCNIEVIDLCINPIKGIEFIKEA
KTLGINKVLIQPGAESEEVLNFCKENGICAIEGCALVELSRR
>Mature_122_residues
MLAKDFLDFKNWCVVGDVGNEKKYAYRILNKLKENGYNAFGVSLKDGENIFKRLKEVPCNIEVIDLCINPIKGIEFIKEA
KTLGINKVLIQPGAESEEVLNFCKENGICAIEGCALVELSRR

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13713; Mature: 13713

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKDFLDFKNWCVVGDVGNEKKYAYRILNKLKENGYNAFGVSLKDGENIFKRLKEVPCN
CCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC
IEVIDLCINPIKGIEFIKEAKTLGINKVLIQPGAESEEVLNFCKENGICAIEGCALVELS
EEEHEEHHCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCEEEEEC
RR
CC
>Mature Secondary Structure
MLAKDFLDFKNWCVVGDVGNEKKYAYRILNKLKENGYNAFGVSLKDGENIFKRLKEVPCN
CCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC
IEVIDLCINPIKGIEFIKEAKTLGINKVLIQPGAESEEVLNFCKENGICAIEGCALVELS
EEEHEEHHCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCEEEEEC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA