| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310544
Identifier: 18310544
GI number: 18310544
Start: 1831971
End: 1832480
Strand: Reverse
Name: 18310544
Synonym: CPE1562
Alternate gene names: NA
Gene position: 1832480-1831971 (Counterclockwise)
Preceding gene: 18310545
Following gene: 18310543
Centisome position: 60.45
GC content: 21.96
Gene sequence:
>510_bases ATGAATATAAGCAAAGGAATATATTTGCTTAGTGACAGCGGAGGAAGAATGTTAAAAGTAACTTTATTTGAAACTTTAGT AAGGGGAATACCAGAAGCTCTTACGATGATGTTAGCCATGTATGCTTTCGCTAATAAAAAGTTAGAAAAGAAGGAATATT TAATTTCAAGTTTGATATTGGTATTAGTAGTTTATTTAATTAGATTATTACCTATAAATTATGGTATTCATACAATATTG AACATATTTGTTTTAATATTTTTAGCATTCAATGTTAATAAAATAGATTTAATAGTAAGTATAAAAGCATCAATATTAAT ATTAATGATTTTATTTTTATGTGAAGGTTTAAACTTATTATTTATAGAGAAATTTTTCAATGAAAATATTGATTATTTAT TTGAAAATGTATTTACAAAAACAATATTAGGTATTCCATCTACTATAATGTTTATGGTTATTGTTACTTATTATTATTTA ATAGCATCAAAAAAAGGAAAGTTGAGATAA
Upstream 100 bases:
>100_bases ATAGATGTAGGATATAGTGTTTTAAGTATTGGTGATATACTTATAAGAGTTTTTGTAGTCATAATAATATATGTTACAGT TAAAAAAACTAATGAGAAAA
Downstream 100 bases:
>100_bases AATGATTGAGAATATATCGAAGTTAATAGCTGAAAAAGTTTCTAGTGAATTAAATTATGATAATGAAAGAAAAGAAATTA TTCAGTATGGAACTTATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLILVLVVYLIRLLPINYGIHTIL NIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLLFIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYL IASKKGKLR
Sequences:
>Translated_169_residues MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLILVLVVYLIRLLPINYGIHTIL NIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLLFIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYL IASKKGKLR >Mature_169_residues MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLILVLVVYLIRLLPINYGIHTIL NIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLLFIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYL IASKKGKLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19392; Mature: 19392
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLIL CCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VLVVYLIRLLPINYGIHTILNIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH FIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYLIASKKGKLR HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLIL CCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VLVVYLIRLLPINYGIHTILNIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH FIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYLIASKKGKLR HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA