| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310495
Identifier: 18310495
GI number: 18310495
Start: 1770238
End: 1771338
Strand: Reverse
Name: 18310495
Synonym: CPE1513
Alternate gene names: NA
Gene position: 1771338-1770238 (Counterclockwise)
Preceding gene: 18310496
Following gene: 18310494
Centisome position: 58.43
GC content: 24.07
Gene sequence:
>1101_bases ATGAAAAAGCATCCAATTGTTTATATGTTTTTTTCTTTTATAATGATTTTAACCTTTTTCGATATTGTAAAGAAAGATAA TAGTTTTTCAGAGCTAGAAAATAGGAATCTTGCAAGGAAACCTATATTTTCAATAAGTGCTTTTATAGAGGGAAAATACA GAGATAAATATGAAGAGTATATAAATGATAATTTTATTTTTAGAAATCAGTGGATAAACTTAAAATCCATAAGTGAGTAC ACCTTAGGAAAGTTAGAAAATAACAATATAATTTATGGAAAAGAAAACTATATGTTTGAAAAGAATATTTCTTATGATAA GGAGAGATTTAAAAATAACATAGATTCCATAAATAAATTTATTGATATATATGATGGCAAGGTTACTACTATGATAGTTC CAAATTCATATACCATTTATGAGGAATATATTCCATGGGGAATCAAACTTTTAAATCAAGAGAATCTTATAAATGAAGTT TATAGGGCAAATGATAAAGGTAGAAATATAGATTTAGTTAGTTTATTTAAGAAGAACAAAGAGGAATATATATATTATAA AACTGATCACCATTGGACAAGTTATGGGGCATATTTAGCATATAAAGCTTATATTGAAAGCTTAGGAGAAAAACCTATTG ATTTAAATAGTTTAAAAAAGAATGAGGTTACGGGATTTTATGGAACCTATTTTTCAAAGGCTAAGCTTTTTAGTGCAGAA AGTGATATTTTAACTTATTATGATATAGATAATATTACTATGAATATACAGGGGAAAATTTTTGAAAGTTTATATGATTA TGATAAGTTAAAGACTAGGGACAAGTACTCAGTATTTATTAAGGGAAATAATGGACTTACTATTATAGAAAATAAAAACA TAAAGTTAGGAAAAAAATTATTGATATTTAAAGATTCCTTTGCTAATTCTATGATTCCATTTTTAAGTCAAAATTTTAAG GAAATTCATGTGGTTGATCTTAGGAGTTTTTCATGGAAAGTAAGTGAATATATGAAAAATACGAATTTTGATGAGATATT AATATTATATAATATGGAAAATTTTCTGAGAGATATAAATATTACTAGGATAAAATATTAA
Upstream 100 bases:
>100_bases GCTTAGTATTAATGATGGTGTTTATATTATCTGTAGCATATTTAGTGGATTCTACTTATAATCCATTTCTTTATTTTAGA TTTTAGAAAGGAAATATTTT
Downstream 100 bases:
>100_bases ATTTGATGTGACATTGTTTGACAATATTCTTGTTTTTTGAGAAAATTAAATTGTTATTTTAGTTTTAGAGAGGTAATAAA ATTGAATATAAAAAAATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKKHPIVYMFFSFIMILTFFDIVKKDNSFSELENRNLARKPIFSISAFIEGKYRDKYEEYINDNFIFRNQWINLKSISEY TLGKLENNNIIYGKENYMFEKNISYDKERFKNNIDSINKFIDIYDGKVTTMIVPNSYTIYEEYIPWGIKLLNQENLINEV YRANDKGRNIDLVSLFKKNKEEYIYYKTDHHWTSYGAYLAYKAYIESLGEKPIDLNSLKKNEVTGFYGTYFSKAKLFSAE SDILTYYDIDNITMNIQGKIFESLYDYDKLKTRDKYSVFIKGNNGLTIIENKNIKLGKKLLIFKDSFANSMIPFLSQNFK EIHVVDLRSFSWKVSEYMKNTNFDEILILYNMENFLRDINITRIKY
Sequences:
>Translated_366_residues MKKHPIVYMFFSFIMILTFFDIVKKDNSFSELENRNLARKPIFSISAFIEGKYRDKYEEYINDNFIFRNQWINLKSISEY TLGKLENNNIIYGKENYMFEKNISYDKERFKNNIDSINKFIDIYDGKVTTMIVPNSYTIYEEYIPWGIKLLNQENLINEV YRANDKGRNIDLVSLFKKNKEEYIYYKTDHHWTSYGAYLAYKAYIESLGEKPIDLNSLKKNEVTGFYGTYFSKAKLFSAE SDILTYYDIDNITMNIQGKIFESLYDYDKLKTRDKYSVFIKGNNGLTIIENKNIKLGKKLLIFKDSFANSMIPFLSQNFK EIHVVDLRSFSWKVSEYMKNTNFDEILILYNMENFLRDINITRIKY >Mature_366_residues MKKHPIVYMFFSFIMILTFFDIVKKDNSFSELENRNLARKPIFSISAFIEGKYRDKYEEYINDNFIFRNQWINLKSISEY TLGKLENNNIIYGKENYMFEKNISYDKERFKNNIDSINKFIDIYDGKVTTMIVPNSYTIYEEYIPWGIKLLNQENLINEV YRANDKGRNIDLVSLFKKNKEEYIYYKTDHHWTSYGAYLAYKAYIESLGEKPIDLNSLKKNEVTGFYGTYFSKAKLFSAE SDILTYYDIDNITMNIQGKIFESLYDYDKLKTRDKYSVFIKGNNGLTIIENKNIKLGKKLLIFKDSFANSMIPFLSQNFK EIHVVDLRSFSWKVSEYMKNTNFDEILILYNMENFLRDINITRIKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43764; Mature: 43764
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHPIVYMFFSFIMILTFFDIVKKDNSFSELENRNLARKPIFSISAFIEGKYRDKYEEY CCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHEEEEHHCCCHHHHHHHH INDNFIFRNQWINLKSISEYTLGKLENNNIIYGKENYMFEKNISYDKERFKNNIDSINKF CCCCEEEEECCCCCCCCCHHHHCEECCCCEEECCCCEEEECCCCCCHHHHHCCHHHHHHH IDIYDGKVTTMIVPNSYTIYEEYIPWGIKLLNQENLINEVYRANDKGRNIDLVSLFKKNK HHHCCCEEEEEEECCCEEEEHHHCCCCEEEECHHHHHHHHHHCCCCCCCEEEHHHHHCCC EEYIYYKTDHHWTSYGAYLAYKAYIESLGEKPIDLNSLKKNEVTGFYGTYFSKAKLFSAE CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHEEECCC SDILTYYDIDNITMNIQGKIFESLYDYDKLKTRDKYSVFIKGNNGLTIIENKNIKLGKKL CCEEEEEEECCEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCEE LIFKDSFANSMIPFLSQNFKEIHVVDLRSFSWKVSEYMKNTNFDEILILYNMENFLRDIN EEEECCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEHHHHHHCCC ITRIKY EEEEEC >Mature Secondary Structure MKKHPIVYMFFSFIMILTFFDIVKKDNSFSELENRNLARKPIFSISAFIEGKYRDKYEEY CCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHEEEEHHCCCHHHHHHHH INDNFIFRNQWINLKSISEYTLGKLENNNIIYGKENYMFEKNISYDKERFKNNIDSINKF CCCCEEEEECCCCCCCCCHHHHCEECCCCEEECCCCEEEECCCCCCHHHHHCCHHHHHHH IDIYDGKVTTMIVPNSYTIYEEYIPWGIKLLNQENLINEVYRANDKGRNIDLVSLFKKNK HHHCCCEEEEEEECCCEEEEHHHCCCCEEEECHHHHHHHHHHCCCCCCCEEEHHHHHCCC EEYIYYKTDHHWTSYGAYLAYKAYIESLGEKPIDLNSLKKNEVTGFYGTYFSKAKLFSAE CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHEEECCC SDILTYYDIDNITMNIQGKIFESLYDYDKLKTRDKYSVFIKGNNGLTIIENKNIKLGKKL CCEEEEEEECCEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCEE LIFKDSFANSMIPFLSQNFKEIHVVDLRSFSWKVSEYMKNTNFDEILILYNMENFLRDIN EEEECCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEHHHHHHCCC ITRIKY EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA