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The map label for this gene is 18310485

Identifier: 18310485

GI number: 18310485

Start: 1755260

End: 1755547

Strand: Reverse

Name: 18310485

Synonym: CPE1503

Alternate gene names: NA

Gene position: 1755547-1755260 (Counterclockwise)

Preceding gene: 18310486

Following gene: 18310484

Centisome position: 57.91

GC content: 31.25

Gene sequence:

>288_bases
ATGGATACTTGTAATGTTAGTTTACAAATACTTCCCTCAGTAGAGGATTCAAGGCTTTATGAAGTTGTTGATAAGGTTAT
TGAATATATAGAATCAACAGGAGTAAAGTTTGAGGTTGGTCCTATGGAAACTACCATGGAAGGAAAAATTGATGATTTAC
TAGAAATTGTGAAAAAATCTCAAGAAATATGCATAGAAGAAGGTGCTGGAAGAGTTATATCAATAGTTAAAATTGATTAT
AAAAAAGGCGGAGTAACCATGGATGAAAAGGTTGGAAAATATAGATAA

Upstream 100 bases:

>100_bases
TATATTACTTATGATAAAATGAAATTATAAGCTTTAAAATAATAGTATTTTTATGTTTAAGGAATAAATTATAAATATTT
TAAGATTAGGAGTGAAGAAT

Downstream 100 bases:

>100_bases
TATAAAGATTAAATAAATTTTATAATTAAACAACTTAATTTACCTCTTGAAAATATTTATATAGTGAAAGATAAATATTT
TTAGGAGGTATTTTATATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MDTCNVSLQILPSVEDSRLYEVVDKVIEYIESTGVKFEVGPMETTMEGKIDDLLEIVKKSQEICIEEGAGRVISIVKIDY
KKGGVTMDEKVGKYR

Sequences:

>Translated_95_residues
MDTCNVSLQILPSVEDSRLYEVVDKVIEYIESTGVKFEVGPMETTMEGKIDDLLEIVKKSQEICIEEGAGRVISIVKIDY
KKGGVTMDEKVGKYR
>Mature_95_residues
MDTCNVSLQILPSVEDSRLYEVVDKVIEYIESTGVKFEVGPMETTMEGKIDDLLEIVKKSQEICIEEGAGRVISIVKIDY
KKGGVTMDEKVGKYR

Specific function: Unknown

COG id: COG0011

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0045 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1503_CLOPE (Q46213)

Other databases:

- EMBL:   U04966
- EMBL:   BA000016
- PIR:   S49553
- RefSeq:   NP_562419.1
- ProteinModelPortal:   Q46213
- SMR:   Q46213
- GeneID:   989813
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1503
- NMPDR:   fig|195102.1.peg.1566
- HOGENOM:   HBG742314
- OMA:   TTMEGEL
- ProtClustDB:   CLSK2754174
- BioCyc:   CPER195102:CPE1503-MONOMER
- InterPro:   IPR002767
- InterPro:   IPR016198
- Gene3D:   G3DSA:3.30.70.930

Pfam domain/function: PF01910 DUF77; SSF89957 Put_thiamin/HMP-bd-like

EC number: NA

Molecular weight: Translated: 10661; Mature: 10661

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTCNVSLQILPSVEDSRLYEVVDKVIEYIESTGVKFEVGPMETTMEGKIDDLLEIVKKS
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH
QEICIEEGAGRVISIVKIDYKKGGVTMDEKVGKYR
HHHHHHCCCCCEEEEEEEECCCCCCCHHHHCCCCC
>Mature Secondary Structure
MDTCNVSLQILPSVEDSRLYEVVDKVIEYIESTGVKFEVGPMETTMEGKIDDLLEIVKKS
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH
QEICIEEGAGRVISIVKIDYKKGGVTMDEKVGKYR
HHHHHHCCCCCEEEEEEEECCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8052128; 11792842