Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310478

Identifier: 18310478

GI number: 18310478

Start: 1748260

End: 1748529

Strand: Direct

Name: 18310478

Synonym: CPE1496

Alternate gene names: NA

Gene position: 1748260-1748529 (Clockwise)

Preceding gene: 18310473

Following gene: 18310479

Centisome position: 57.67

GC content: 26.3

Gene sequence:

>270_bases
ATGAATGCTGTTATTACCGTTGTTGGAAAAGATAAGGTTGGAATAATCCATGGTGTATCTGGTATATTGAATGAAAATAA
TGTAAATATACTAAACATAAGCCAAACAATTATGGATGGTTATTTTACCATGATAATGCTAACAGATATATCAAATTCAA
CTAAGGATATTTCTTCTCTTAAAGAAATTTTCAAAGAGTTCTCTTTAAAAAATTCACTAGATATATCCGTTCAACATGAA
GATATATTTAATTCAATGCATAGAATTTAA

Upstream 100 bases:

>100_bases
AACTAAATTTATTTAAAAACTCATCCAAAATTAAACAAATTAAGTATTATTTGATGTATAATTGTTTATAAATAATTTTT
ATATATTGGGAGGTTTTTAT

Downstream 100 bases:

>100_bases
TTAGGAGTTTGATGGTATGTTAAAGAATAATGAGATTTTAGAAACTATAAGTATGATTAAAGAACAAAACTTAGATGTAA
GAACTATAACTTTAGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNAVITVVGKDKVGIIHGVSGILNENNVNILNISQTIMDGYFTMIMLTDISNSTKDISSLKEIFKEFSLKNSLDISVQHE
DIFNSMHRI

Sequences:

>Translated_89_residues
MNAVITVVGKDKVGIIHGVSGILNENNVNILNISQTIMDGYFTMIMLTDISNSTKDISSLKEIFKEFSLKNSLDISVQHE
DIFNSMHRI
>Mature_89_residues
MNAVITVVGKDKVGIIHGVSGILNENNVNILNISQTIMDGYFTMIMLTDISNSTKDISSLKEIFKEFSLKNSLDISVQHE
DIFNSMHRI

Specific function: Unknown

COG id: COG3830

COG function: function code T; ACT domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1496_CLOPE (Q8XKA4)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562412.1
- ProteinModelPortal:   Q8XKA4
- SMR:   Q8XKA4
- GeneID:   989806
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1496
- NMPDR:   fig|195102.1.peg.1559
- HOGENOM:   HBG305002
- OMA:   FTMIMLV
- ProtClustDB:   PRK00194
- BioCyc:   CPER195102:CPE1496-MONOMER
- HAMAP:   MF_01054
- InterPro:   IPR002912
- InterPro:   IPR022986

Pfam domain/function: PF01842 ACT

EC number: NA

Molecular weight: Translated: 9943; Mature: 9943

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVITVVGKDKVGIIHGVSGILNENNVNILNISQTIMDGYFTMIMLTDISNSTKDISSL
CCEEEEEECCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHEEEEEEECCCCCCHHHHHH
KEIFKEFSLKNSLDISVQHEDIFNSMHRI
HHHHHHHCCCCCCEEEEEHHHHHHHHHCC
>Mature Secondary Structure
MNAVITVVGKDKVGIIHGVSGILNENNVNILNISQTIMDGYFTMIMLTDISNSTKDISSL
CCEEEEEECCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHEEEEEEECCCCCCHHHHHH
KEIFKEFSLKNSLDISVQHEDIFNSMHRI
HHHHHHHCCCCCCEEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842