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The map label for this gene is apl [H]

Identifier: 18310474

GI number: 18310474

Start: 1745657

End: 1746181

Strand: Reverse

Name: apl [H]

Synonym: CPE1492

Alternate gene names: 18310474

Gene position: 1746181-1745657 (Counterclockwise)

Preceding gene: 18310475

Following gene: 18310472

Centisome position: 57.6

GC content: 30.29

Gene sequence:

>525_bases
ATGAAAGGAGAAAGAGAAAGTTTTATGGACATAGATGCTGTGCTAAATTATTTTGCAACTTATGGTTTAACCTTGTTATT
TGTAATAGTATTTTTAGAATATTTAAATTTACCAGGATTACCAGCTGGAATAATAATGCCTGCTGCGGGGATTTTAGCTT
CTAGAAATAATCAAAGTATAGTTCTTGTGGTTTTTATATCAGTTGTGGCTGGAGTTTTAGGAAGTATAGTACTATATTTA
ATAGGATATTATGGAGGGGCAATACTCTTAGATAAATTAGGATTGAAGTTTCCTAAGGTTCAGCCAACCATAAGAAAAAG
TAGTACTATCTTAAAGGAAAAAGGACTTTTTGGAGTTTTTCTTTGTAGACTATTGCCTGTTTTAAGAACCATAGTTTCTA
TTATAGCAGGTTCAGTAAGAATGAATTTCTTTAAGTTTTTAATCTATTCCACCCCAGGGATATTCTTGTGGAATTTAGGA
TTTATATTTACAGGATATTTCTTTGGAGATGTATTTTTAAAATAA

Upstream 100 bases:

>100_bases
TATTTCTTTGGAGGAAAGATAAGATTTTAGTTTGTGATTTTGATTTTGTGTATTGAATTTTATTTAGATTTTAGGGGAAA
ATATTAAATTAAGGGATTAT

Downstream 100 bases:

>100_bases
AAATTAGTATGTAAATAAAAATGGCTGTATTAAAATAATAAGTCAAACTAAAATTTATTAATTAATCTTAGAAAATTAAA
TAATATATTTAAGTTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKGERESFMDIDAVLNYFATYGLTLLFVIVFLEYLNLPGLPAGIIMPAAGILASRNNQSIVLVVFISVVAGVLGSIVLYL
IGYYGGAILLDKLGLKFPKVQPTIRKSSTILKEKGLFGVFLCRLLPVLRTIVSIIAGSVRMNFFKFLIYSTPGIFLWNLG
FIFTGYFFGDVFLK

Sequences:

>Translated_174_residues
MKGERESFMDIDAVLNYFATYGLTLLFVIVFLEYLNLPGLPAGIIMPAAGILASRNNQSIVLVVFISVVAGVLGSIVLYL
IGYYGGAILLDKLGLKFPKVQPTIRKSSTILKEKGLFGVFLCRLLPVLRTIVSIIAGSVRMNFFKFLIYSTPGIFLWNLG
FIFTGYFFGDVFLK
>Mature_174_residues
MKGERESFMDIDAVLNYFATYGLTLLFVIVFLEYLNLPGLPAGIIMPAAGILASRNNQSIVLVVFISVVAGVLGSIVLYL
IGYYGGAILLDKLGLKFPKVQPTIRKSSTILKEKGLFGVFLCRLLPVLRTIVSIIAGSVRMNFFKFLIYSTPGIFLWNLG
FIFTGYFFGDVFLK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=160, Percent_Identity=30.625, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 19252; Mature: 19252

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGERESFMDIDAVLNYFATYGLTLLFVIVFLEYLNLPGLPAGIIMPAAGILASRNNQSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCH
VLVVFISVVAGVLGSIVLYLIGYYGGAILLDKLGLKFPKVQPTIRKSSTILKEKGLFGVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHH
LCRLLPVLRTIVSIIAGSVRMNFFKFLIYSTPGIFLWNLGFIFTGYFFGDVFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGERESFMDIDAVLNYFATYGLTLLFVIVFLEYLNLPGLPAGIIMPAAGILASRNNQSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCH
VLVVFISVVAGVLGSIVLYLIGYYGGAILLDKLGLKFPKVQPTIRKSSTILKEKGLFGVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHH
LCRLLPVLRTIVSIIAGSVRMNFFKFLIYSTPGIFLWNLGFIFTGYFFGDVFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]