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The map label for this gene is ydiF [H]

Identifier: 18310452

GI number: 18310452

Start: 1726809

End: 1728740

Strand: Direct

Name: ydiF [H]

Synonym: CPE1470

Alternate gene names: 18310452

Gene position: 1726809-1728740 (Clockwise)

Preceding gene: 18310449

Following gene: 18310456

Centisome position: 56.96

GC content: 29.81

Gene sequence:

>1932_bases
ATGATTATTTTAAGCTGTAGACACTTAACTAAAAGTTTTGGTATTGATGAGATTTTAAGAGATATAACATTTAATATAAA
TGAAGGTGACAAGGTTGGTTTAATAGGACCAAATGGAGAAGGTAAATCAACCTTATTTAAAATTCTTACCAAGCAACTAG
ATTATGATAGTGGTGAATTATTTTTAGATAAAAACAAAACCCTAGGATATCTCTCTCAGAATTTATCTTTAGATAGTGAA
AATACTATTTATGATGAGATGCTTTCTGTATTCTCATCTTTAACGGAACTTGAAGATAAAATTAAAACCTTAGAAGAAAA
ACTTAATGAACCTTATGATGCTTCAAATGAAGAATATCATAATAAACTTATAAAGGATTATACCTTATCTCAAGAACTTT
ATGAAAATAGAGGCGGTTATACTTTTAGGGGAGAAATTTCTAGAGTTCTTAAAGGTTTAGGTTTTTTAGAGGAAGATTTC
AACAATCAAATTATAAACCTTAGTGGTGGTCAAAAAACTAGATTAGCACTCTGTAAACTGCTTTTAAGAAAACCAGACTT
ACTTCTTTTAGATGAGCCTACAAACCACTTAGATTTAGAAGCTATAGAATGGCTTGAAGAATATCTTAATGGTTATAAGG
GAACAGTCTTTGTTATTTCCCATGATAGATTTTTCTTAGACTCTGTAACAAATACAACCTTTGAACTTATTGGTGGAAAG
ATACATTGTTATAATGCAAGCTACACAAAATTTCTTGAACTTAGAAAAAAGGATATTGAAGCTAGATTAAAAGCTTATAA
TCTTCAACAGGCAGAAATAAAAAGACAAGAGGAAATTATAGAAAAGTTCCGTTCATTTAATAGAGAAAAAAGTGTTAGAG
CTGCTGAAAGTAGACAAAAAGCTTTAGATAAAATGGATCGTCTAGAGGCACCAGAGGTTATAAAAGAAGCTTCTAAAATA
AGCTTTGAAACCTTAGTTAAAAGCGGAAATGATGTTTTACATATTGAAAACCTAAAAAAGAGCTATGATAGTCTTTTATT
TGAAAATGTAAATTTAGATTTAAAACGTGGAGAAAAGGTTGCCCTAATAGGGGAAAATGGTAGAGGTAAGACTACTCTAT
TTAAAATAATAATGGGAATGTTAAAACAGGATTCTGGTTCTGTATCCCTTGGTAAAAACGTATTTACAGGATATTATGAC
CAAGAGCAATCTAATTTAAATCTCCATAAAACCATAATAGATGAAGTTTGGGATGACTTCCCTAATCTTACTACTACTGA
GGTTAGAAATTATCTTGCTTCTTTCCTATTTACTGGTGATGATGTATTTAAAGAAATTTCCCTATTAAGTGGTGGTGAAA
AGTGTAAGATAAACCTTTTAAAACTTATGCTTTCAAAGGCCAATCTTCTTCTCTTAGATGAGCCTACAAATCACTTAGAT
ATTATGTCTAGAGAAGCCCTAGAAGATGCAATTTTAAGTTATGATGGAACTTTAATAGTAATTTCCCATGATAGATACTT
CCTAAATAAAGTAATCAACAAAATTGTTGAACTTCAAGAAAATGGTCTTAAGACATACTTAGGAAATTACAATTATTATA
TGGATAAGAAAGCTAATCCTAATAGATATGAAGATATTGATGAGGAAATAAACCAAGGTAAAACAAAAACCCAAATAAAA
GAAGAAAGAAAAAAGAAAAAATCTGCTGAAAAATCAGCTAGAGCTTTAAGAGCTCAACTTAGAGATGTTGAAAAATTAAT
TCCTCAAAAAGAAGAAGAACTTGAAAAACTTCAAGGAATGCTTTGTACTGAGGAAGTTTATTCAAATCCAGAGGAAAGTG
TAAGAGTAAATAAAGAAATTAATTCAGTTCAAGAAGAAATAGATTCTCTTTACGCTACTTGGGAAGAGCTTTCTGAATCT
CTTGAGGAATAA

Upstream 100 bases:

>100_bases
TGAAATCCTTTCTAAGCAAACATTTAATTTGATGAAATTCTTCATTATTAGTATAATTGTATGTGATTAATACTATAAAT
TCGATGATAGGAGTTTTAAA

Downstream 100 bases:

>100_bases
AATAATAAAAGAATTTATTTATATAACAATCTAAAAAAGAGAATGCATGGAAAGTTCTTTTTTAAAAAATTTCCCATGTA
TTCTCTTTTAAATTGAACTT

Product: prbable ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MIILSCRHLTKSFGIDEILRDITFNINEGDKVGLIGPNGEGKSTLFKILTKQLDYDSGELFLDKNKTLGYLSQNLSLDSE
NTIYDEMLSVFSSLTELEDKIKTLEEKLNEPYDASNEEYHNKLIKDYTLSQELYENRGGYTFRGEISRVLKGLGFLEEDF
NNQIINLSGGQKTRLALCKLLLRKPDLLLLDEPTNHLDLEAIEWLEEYLNGYKGTVFVISHDRFFLDSVTNTTFELIGGK
IHCYNASYTKFLELRKKDIEARLKAYNLQQAEIKRQEEIIEKFRSFNREKSVRAAESRQKALDKMDRLEAPEVIKEASKI
SFETLVKSGNDVLHIENLKKSYDSLLFENVNLDLKRGEKVALIGENGRGKTTLFKIIMGMLKQDSGSVSLGKNVFTGYYD
QEQSNLNLHKTIIDEVWDDFPNLTTTEVRNYLASFLFTGDDVFKEISLLSGGEKCKINLLKLMLSKANLLLLDEPTNHLD
IMSREALEDAILSYDGTLIVISHDRYFLNKVINKIVELQENGLKTYLGNYNYYMDKKANPNRYEDIDEEINQGKTKTQIK
EERKKKKSAEKSARALRAQLRDVEKLIPQKEEELEKLQGMLCTEEVYSNPEESVRVNKEINSVQEEIDSLYATWEELSES
LEE

Sequences:

>Translated_643_residues
MIILSCRHLTKSFGIDEILRDITFNINEGDKVGLIGPNGEGKSTLFKILTKQLDYDSGELFLDKNKTLGYLSQNLSLDSE
NTIYDEMLSVFSSLTELEDKIKTLEEKLNEPYDASNEEYHNKLIKDYTLSQELYENRGGYTFRGEISRVLKGLGFLEEDF
NNQIINLSGGQKTRLALCKLLLRKPDLLLLDEPTNHLDLEAIEWLEEYLNGYKGTVFVISHDRFFLDSVTNTTFELIGGK
IHCYNASYTKFLELRKKDIEARLKAYNLQQAEIKRQEEIIEKFRSFNREKSVRAAESRQKALDKMDRLEAPEVIKEASKI
SFETLVKSGNDVLHIENLKKSYDSLLFENVNLDLKRGEKVALIGENGRGKTTLFKIIMGMLKQDSGSVSLGKNVFTGYYD
QEQSNLNLHKTIIDEVWDDFPNLTTTEVRNYLASFLFTGDDVFKEISLLSGGEKCKINLLKLMLSKANLLLLDEPTNHLD
IMSREALEDAILSYDGTLIVISHDRYFLNKVINKIVELQENGLKTYLGNYNYYMDKKANPNRYEDIDEEINQGKTKTQIK
EERKKKKSAEKSARALRAQLRDVEKLIPQKEEELEKLQGMLCTEEVYSNPEESVRVNKEINSVQEEIDSLYATWEELSES
LEE
>Mature_643_residues
MIILSCRHLTKSFGIDEILRDITFNINEGDKVGLIGPNGEGKSTLFKILTKQLDYDSGELFLDKNKTLGYLSQNLSLDSE
NTIYDEMLSVFSSLTELEDKIKTLEEKLNEPYDASNEEYHNKLIKDYTLSQELYENRGGYTFRGEISRVLKGLGFLEEDF
NNQIINLSGGQKTRLALCKLLLRKPDLLLLDEPTNHLDLEAIEWLEEYLNGYKGTVFVISHDRFFLDSVTNTTFELIGGK
IHCYNASYTKFLELRKKDIEARLKAYNLQQAEIKRQEEIIEKFRSFNREKSVRAAESRQKALDKMDRLEAPEVIKEASKI
SFETLVKSGNDVLHIENLKKSYDSLLFENVNLDLKRGEKVALIGENGRGKTTLFKIIMGMLKQDSGSVSLGKNVFTGYYD
QEQSNLNLHKTIIDEVWDDFPNLTTTEVRNYLASFLFTGDDVFKEISLLSGGEKCKINLLKLMLSKANLLLLDEPTNHLD
IMSREALEDAILSYDGTLIVISHDRYFLNKVINKIVELQENGLKTYLGNYNYYMDKKANPNRYEDIDEEINQGKTKTQIK
EERKKKKSAEKSARALRAQLRDVEKLIPQKEEELEKLQGMLCTEEVYSNPEESVRVNKEINSVQEEIDSLYATWEELSES
LEE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=28.4090909090909, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI10947137, Length=532, Percent_Identity=29.5112781954887, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI27881506, Length=532, Percent_Identity=29.5112781954887, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI69354671, Length=542, Percent_Identity=27.6752767527675, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI10947135, Length=542, Percent_Identity=27.6752767527675, Blast_Score=189, Evalue=6e-48,
Organism=Escherichia coli, GI2367384, Length=526, Percent_Identity=36.5019011406844, Blast_Score=305, Evalue=8e-84,
Organism=Escherichia coli, GI1789751, Length=608, Percent_Identity=31.0855263157895, Blast_Score=303, Evalue=3e-83,
Organism=Escherichia coli, GI1787041, Length=543, Percent_Identity=34.4383057090239, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1787182, Length=652, Percent_Identity=30.8282208588957, Blast_Score=275, Evalue=8e-75,
Organism=Escherichia coli, GI1789593, Length=210, Percent_Identity=24.2857142857143, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=24.6376811594203, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=27.319587628866, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788225, Length=277, Percent_Identity=22.7436823104693, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=528, Percent_Identity=29.1666666666667, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=30.377358490566, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17559834, Length=533, Percent_Identity=28.7054409005629, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI25146777, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=31.098696461825, Blast_Score=236, Evalue=9e-63,
Organism=Saccharomyces cerevisiae, GI6320874, Length=533, Percent_Identity=31.8949343339587, Blast_Score=233, Evalue=9e-62,
Organism=Saccharomyces cerevisiae, GI6324314, Length=394, Percent_Identity=26.3959390862944, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=402, Percent_Identity=28.1094527363184, Blast_Score=114, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=393, Percent_Identity=27.2264631043257, Blast_Score=104, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=32.0224719101124, Blast_Score=249, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24642252, Length=540, Percent_Identity=31.2962962962963, Blast_Score=235, Evalue=8e-62,
Organism=Drosophila melanogaster, GI18859989, Length=540, Percent_Identity=31.2962962962963, Blast_Score=235, Evalue=8e-62,
Organism=Drosophila melanogaster, GI24641342, Length=525, Percent_Identity=28.952380952381, Blast_Score=208, Evalue=1e-53,
Organism=Drosophila melanogaster, GI28574259, Length=315, Percent_Identity=24.4444444444444, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74045; Mature: 74045

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILSCRHLTKSFGIDEILRDITFNINEGDKVGLIGPNGEGKSTLFKILTKQLDYDSGEL
CEEEEEHHHHHHCCHHHHHHHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCE
FLDKNKTLGYLSQNLSLDSENTIYDEMLSVFSSLTELEDKIKTLEEKLNEPYDASNEEYH
EEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
NKLIKDYTLSQELYENRGGYTFRGEISRVLKGLGFLEEDFNNQIINLSGGQKTRLALCKL
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHH
LLRKPDLLLLDEPTNHLDLEAIEWLEEYLNGYKGTVFVISHDRFFLDSVTNTTFELIGGK
HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCHHHHHHCCE
IHCYNASYTKFLELRKKDIEARLKAYNLQQAEIKRQEEIIEKFRSFNREKSVRAAESRQK
EEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALDKMDRLEAPEVIKEASKISFETLVKSGNDVLHIENLKKSYDSLLFENVNLDLKRGEKV
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCEECCCCEE
ALIGENGRGKTTLFKIIMGMLKQDSGSVSLGKNVFTGYYDQEQSNLNLHKTIIDEVWDDF
EEEECCCCCHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHC
PNLTTTEVRNYLASFLFTGDDVFKEISLLSGGEKCKINLLKLMLSKANLLLLDEPTNHLD
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHH
IMSREALEDAILSYDGTLIVISHDRYFLNKVINKIVELQENGLKTYLGNYNYYMDKKANP
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCC
NRYEDIDEEINQGKTKTQIKEERKKKKSAEKSARALRAQLRDVEKLIPQKEEELEKLQGM
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LCTEEVYSNPEESVRVNKEINSVQEEIDSLYATWEELSESLEE
HHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIILSCRHLTKSFGIDEILRDITFNINEGDKVGLIGPNGEGKSTLFKILTKQLDYDSGEL
CEEEEEHHHHHHCCHHHHHHHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCE
FLDKNKTLGYLSQNLSLDSENTIYDEMLSVFSSLTELEDKIKTLEEKLNEPYDASNEEYH
EEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
NKLIKDYTLSQELYENRGGYTFRGEISRVLKGLGFLEEDFNNQIINLSGGQKTRLALCKL
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHH
LLRKPDLLLLDEPTNHLDLEAIEWLEEYLNGYKGTVFVISHDRFFLDSVTNTTFELIGGK
HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCHHHHHHCCE
IHCYNASYTKFLELRKKDIEARLKAYNLQQAEIKRQEEIIEKFRSFNREKSVRAAESRQK
EEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALDKMDRLEAPEVIKEASKISFETLVKSGNDVLHIENLKKSYDSLLFENVNLDLKRGEKV
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCEECCCCEE
ALIGENGRGKTTLFKIIMGMLKQDSGSVSLGKNVFTGYYDQEQSNLNLHKTIIDEVWDDF
EEEECCCCCHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHC
PNLTTTEVRNYLASFLFTGDDVFKEISLLSGGEKCKINLLKLMLSKANLLLLDEPTNHLD
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHH
IMSREALEDAILSYDGTLIVISHDRYFLNKVINKIVELQENGLKTYLGNYNYYMDKKANP
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCC
NRYEDIDEEINQGKTKTQIKEERKKKKSAEKSARALRAQLRDVEKLIPQKEEELEKLQGM
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LCTEEVYSNPEESVRVNKEINSVQEEIDSLYATWEELSESLEE
HHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]