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The map label for this gene is 18310428

Identifier: 18310428

GI number: 18310428

Start: 1704792

End: 1706057

Strand: Reverse

Name: 18310428

Synonym: CPE1446

Alternate gene names: NA

Gene position: 1706057-1704792 (Counterclockwise)

Preceding gene: 18310429

Following gene: 18310426

Centisome position: 56.28

GC content: 24.88

Gene sequence:

>1266_bases
ATGGATTTTTTATCTACTGGGGAGAAAATAAAAAGAGCTAGAATATATAAAGGTTTAACATTAAAGCAACTTTGTGAAGA
TGATATATCTATATCTAGAATGAGCTGTATAGAGAATGGAAAAGTAAAAGCAGATAAATGGGTGCTAGAGTTAGTTGCTA
AAAGATTAGATTTAGATTTAGAGTATCTTTTATGTGATGATATAACACAACTAAATAATTCTATTGATAAGTATATTCAA
AAGAAAGTCTTAACTGAAAGTGAAGCTGATGAGATAAAAGAGTACTTAGAATATTCTTTAAGCAAAGAATATGAAGATAT
TTCTGCAAAACTTATGCATATTTTATTTATAAATTATACTAATATTAGGGAATTTAAAAAAGCAAAAGATTTATTAAATG
AGTATTCAAACATATACGAAAGCAATAAAGAGAGTAAAAGATTATATTATGAGGATTTAGCTTTATATTTTACAGTAAGA
AAGAATTTTGCAGATGCAATAACATATTATAACATGCTTTTAGATTTCCTATTAAAAGATGGAATAGAAAAAAATAATGA
GCTTTATATAAAAAATGCTACAGCTTTAGCAATATGTAATTACAGAGTTGGTAATATAGAGAAAAGTAGAGAAATAATAA
AAGATATTTTCTCTATTCATGGAATTGATCTTAATAGTAAGTGCTTAGGGGAAGCCCAAGGAATTTTAGCTATTTTAGCA
CTTCTAGAAGGAAATAATGAAGAGTTTGAAAGAAATTATACTTATTATAAAGAAAAGATAGATTGTAATTCTTACAACTG
GAAAAGAATAAATAGTCTTATTATTGATGCTTTCTTAAAATGCGGAGAATATGAAGAAGCCCAAAAGCTTACTGAAGAAT
CTATAGAACAGGTTAATAAGGAAGATAAAATAGGGTATATAGAACTTTTATTATTTATAATAAATGTTTACAATGCTAAT
GGATGTATAGAAAGTGTTAAGGAATATTGTGAATTATCACTAGAATTAGCAATAAATAAAAATAATATGTTCTTTATAGA
GAGAAGTTATTATTTTAAAGCAGAATTAAGTAAAAATGAGAGAAATGATATGCAATGGGAAATGTATATGAATTTAGCAA
CAGATCTTTTACTTAAATTTGGTACATATGAAGAGAAAAGAGAAAGATATTTAGAAATGGCTGATCTTTATCACTATTTA
GATGATACTAATGAAGCTTTAAAATATTTAAGTTTTGCTATAAAAGAAGTGGATAATTTATATTAA

Upstream 100 bases:

>100_bases
GAGCTTAAGAGAGATTATGAAGCGGCTAAATACTTAGACAAGGGTATAAATAACCTGAAAAATTTAGGTGTAATTAAAAG
TTAAGGTATAGGTGAGAGTG

Downstream 100 bases:

>100_bases
TATAGAATTAAGGAATTATATTAAATTAACTTTTTATACGCTTTACAAACACTATGAAGAGAATATCTAGTAATTCTCGG
AATATGTTTGTAAAGTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Ferrous Iron Transport Protein B-Like Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MDFLSTGEKIKRARIYKGLTLKQLCEDDISISRMSCIENGKVKADKWVLELVAKRLDLDLEYLLCDDITQLNNSIDKYIQ
KKVLTESEADEIKEYLEYSLSKEYEDISAKLMHILFINYTNIREFKKAKDLLNEYSNIYESNKESKRLYYEDLALYFTVR
KNFADAITYYNMLLDFLLKDGIEKNNELYIKNATALAICNYRVGNIEKSREIIKDIFSIHGIDLNSKCLGEAQGILAILA
LLEGNNEEFERNYTYYKEKIDCNSYNWKRINSLIIDAFLKCGEYEEAQKLTEESIEQVNKEDKIGYIELLLFIINVYNAN
GCIESVKEYCELSLELAINKNNMFFIERSYYFKAELSKNERNDMQWEMYMNLATDLLLKFGTYEEKRERYLEMADLYHYL
DDTNEALKYLSFAIKEVDNLY

Sequences:

>Translated_421_residues
MDFLSTGEKIKRARIYKGLTLKQLCEDDISISRMSCIENGKVKADKWVLELVAKRLDLDLEYLLCDDITQLNNSIDKYIQ
KKVLTESEADEIKEYLEYSLSKEYEDISAKLMHILFINYTNIREFKKAKDLLNEYSNIYESNKESKRLYYEDLALYFTVR
KNFADAITYYNMLLDFLLKDGIEKNNELYIKNATALAICNYRVGNIEKSREIIKDIFSIHGIDLNSKCLGEAQGILAILA
LLEGNNEEFERNYTYYKEKIDCNSYNWKRINSLIIDAFLKCGEYEEAQKLTEESIEQVNKEDKIGYIELLLFIINVYNAN
GCIESVKEYCELSLELAINKNNMFFIERSYYFKAELSKNERNDMQWEMYMNLATDLLLKFGTYEEKRERYLEMADLYHYL
DDTNEALKYLSFAIKEVDNLY
>Mature_421_residues
MDFLSTGEKIKRARIYKGLTLKQLCEDDISISRMSCIENGKVKADKWVLELVAKRLDLDLEYLLCDDITQLNNSIDKYIQ
KKVLTESEADEIKEYLEYSLSKEYEDISAKLMHILFINYTNIREFKKAKDLLNEYSNIYESNKESKRLYYEDLALYFTVR
KNFADAITYYNMLLDFLLKDGIEKNNELYIKNATALAICNYRVGNIEKSREIIKDIFSIHGIDLNSKCLGEAQGILAILA
LLEGNNEEFERNYTYYKEKIDCNSYNWKRINSLIIDAFLKCGEYEEAQKLTEESIEQVNKEDKIGYIELLLFIINVYNAN
GCIESVKEYCELSLELAINKNNMFFIERSYYFKAELSKNERNDMQWEMYMNLATDLLLKFGTYEEKRERYLEMADLYHYL
DDTNEALKYLSFAIKEVDNLY

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49778; Mature: 49778

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLSTGEKIKRARIYKGLTLKQLCEDDISISRMSCIENGKVKADKWVLELVAKRLDLDL
CCCCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
EYLLCDDITQLNNSIDKYIQKKVLTESEADEIKEYLEYSLSKEYEDISAKLMHILFINYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NIREFKKAKDLLNEYSNIYESNKESKRLYYEDLALYFTVRKNFADAITYYNMLLDFLLKD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIEKNNELYIKNATALAICNYRVGNIEKSREIIKDIFSIHGIDLNSKCLGEAQGILAILA
CCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLEGNNEEFERNYTYYKEKIDCNSYNWKRINSLIIDAFLKCGEYEEAQKLTEESIEQVNK
HHCCCCHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
EDKIGYIELLLFIINVYNANGCIESVKEYCELSLELAINKNNMFFIERSYYFKAELSKNE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEEECCCEEEEEECEEEEEECCCCC
RNDMQWEMYMNLATDLLLKFGTYEEKRERYLEMADLYHYLDDTNEALKYLSFAIKEVDNL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
Y
C
>Mature Secondary Structure
MDFLSTGEKIKRARIYKGLTLKQLCEDDISISRMSCIENGKVKADKWVLELVAKRLDLDL
CCCCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
EYLLCDDITQLNNSIDKYIQKKVLTESEADEIKEYLEYSLSKEYEDISAKLMHILFINYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NIREFKKAKDLLNEYSNIYESNKESKRLYYEDLALYFTVRKNFADAITYYNMLLDFLLKD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIEKNNELYIKNATALAICNYRVGNIEKSREIIKDIFSIHGIDLNSKCLGEAQGILAILA
CCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLEGNNEEFERNYTYYKEKIDCNSYNWKRINSLIIDAFLKCGEYEEAQKLTEESIEQVNK
HHCCCCHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
EDKIGYIELLLFIINVYNANGCIESVKEYCELSLELAINKNNMFFIERSYYFKAELSKNE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEEECCCEEEEEECEEEEEECCCCC
RNDMQWEMYMNLATDLLLKFGTYEEKRERYLEMADLYHYLDDTNEALKYLSFAIKEVDNL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA