The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18310382

Identifier: 18310382

GI number: 18310382

Start: 1651637

End: 1651981

Strand: Reverse

Name: 18310382

Synonym: CPE1400

Alternate gene names: NA

Gene position: 1651981-1651637 (Counterclockwise)

Preceding gene: 18310383

Following gene: 18310381

Centisome position: 54.5

GC content: 23.77

Gene sequence:

>345_bases
ATGGATAAATTATTTACTATAAGTGGAGTAGATTTTTTAGCAGGGGATTTTCAAGATGATATAAGTGAATTTCAAGATAT
AATACCTATATTACAAGATTTTCAAGAAGAATTAAAATTAGAGAAAATAAAGTGTACAGATGAAAATGATTGCTGTTTTA
AAACTAAAGAAAATTATATATGTGAATTAGTTGGGGCTTTAACTGAAGATGATGAATTTTATTCATTAAAAGAGTTAAGA
AGTGATTATAATAGATTTAAAGATGAAATGCTATATCCTTTTGGAATACAAGTTTATAAATGTACATCATGTAATAAATG
GATTATAAATTTACTAGAGGAGTAA

Upstream 100 bases:

>100_bases
AATAATATTTATTATGCTAAAATAAGTTAGTAAAATTAATTAATTTATGTAATACTAGAATTAGTTAGCAAATTTTAATT
AGGAAATTAGAGGTGATTAA

Downstream 100 bases:

>100_bases
GTTTTAACATATGGATAAATTGAGAGAGAGTATTACAGGGGTAGGTCATAACATTTGTAGCTTTTATAAAAGAGTAAAGG
ATAAAATTATAAAAGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MDKLFTISGVDFLAGDFQDDISEFQDIIPILQDFQEELKLEKIKCTDENDCCFKTKENYICELVGALTEDDEFYSLKELR
SDYNRFKDEMLYPFGIQVYKCTSCNKWIINLLEE

Sequences:

>Translated_114_residues
MDKLFTISGVDFLAGDFQDDISEFQDIIPILQDFQEELKLEKIKCTDENDCCFKTKENYICELVGALTEDDEFYSLKELR
SDYNRFKDEMLYPFGIQVYKCTSCNKWIINLLEE
>Mature_114_residues
MDKLFTISGVDFLAGDFQDDISEFQDIIPILQDFQEELKLEKIKCTDENDCCFKTKENYICELVGALTEDDEFYSLKELR
SDYNRFKDEMLYPFGIQVYKCTSCNKWIINLLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13498; Mature: 13498

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLFTISGVDFLAGDFQDDISEFQDIIPILQDFQEELKLEKIKCTDENDCCFKTKENYI
CCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHH
CELVGALTEDDEFYSLKELRSDYNRFKDEMLYPFGIQVYKCTSCNKWIINLLEE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCC
>Mature Secondary Structure
MDKLFTISGVDFLAGDFQDDISEFQDIIPILQDFQEELKLEKIKCTDENDCCFKTKENYI
CCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHH
CELVGALTEDDEFYSLKELRSDYNRFKDEMLYPFGIQVYKCTSCNKWIINLLEE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA