| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pssA [H]
Identifier: 18310311
GI number: 18310311
Start: 1570535
End: 1571056
Strand: Direct
Name: pssA [H]
Synonym: CPE1329
Alternate gene names: 18310311
Gene position: 1570535-1571056 (Clockwise)
Preceding gene: 18310308
Following gene: 18310321
Centisome position: 51.81
GC content: 28.16
Gene sequence:
>522_bases ATGAGAAAAAGTAGTATACCAAATATATTTACTTTTATAAACCTATCTTTTGGTATATTATCATTATTAGCAACATTTAA ATCAGAGTATTTATTAGCAGCAATATTTATACTTCTTGCTGGATTAGTTGATAGATATGACGGAAGAGTTGCTCGTTATT TAAATGTTTCTAGTGATCTTGGTAAGGAACTAGATTCTTTAGCGGATTTAGTATCATTTGGTGTGGCACCATCAGTATTA ACTTTTGTATTTTATAATTTTGAATCTTTAGGTCCTATGGGAATTATAGGTTATGCATTGTTACTTTGCTTCCCTATTTG TGGAGCTTTCAGATTAGCTAGATACAATGCAACTGAATTTGACGGTGTATTTAGAGGAGTACCTATAACTATTGCTGGAG CTGTTGTTGCTTTATTTATTTTATTATCAATAAAGTTTACTTTAAATATTTTATTCCCAGTAGTAATTTTAGTTGTATTC TCTTACTTAATGGTTAGTAATTTACAATTAAAGAAATTTTAA
Upstream 100 bases:
>100_bases ACAATTAGTCCAAAGTTATTTTGTTCTAAGATATATTTAATTTTGGGATTTACATTAATATAATTTTATTATTGTTAATA TTTTTATTAGGAGTGATTAT
Downstream 100 bases:
>100_bases CAAAAAATCCTATTAAAGAATTTTCTTTAATAGGATTTTTTATTATTTATTCTTCTTCCTCTCTATTAGAGTTTTCAAAA AGTAAGTCCTGCTCTACTTC
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDLGKELDSLADLVSFGVAPSVL TFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEFDGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVF SYLMVSNLQLKKF
Sequences:
>Translated_173_residues MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDLGKELDSLADLVSFGVAPSVL TFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEFDGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVF SYLMVSNLQLKKF >Mature_173_residues MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDLGKELDSLADLVSFGVAPSVL TFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEFDGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVF SYLMVSNLQLKKF
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=125, Percent_Identity=40.8, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 19059; Mature: 19059
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH GKELDSLADLVSFGVAPSVLTFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH DGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVFSYLMVSNLQLKKF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH GKELDSLADLVSFGVAPSVLTFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH DGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVFSYLMVSNLQLKKF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8002567; 9384377 [H]