Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is pssA [H]

Identifier: 18310311

GI number: 18310311

Start: 1570535

End: 1571056

Strand: Direct

Name: pssA [H]

Synonym: CPE1329

Alternate gene names: 18310311

Gene position: 1570535-1571056 (Clockwise)

Preceding gene: 18310308

Following gene: 18310321

Centisome position: 51.81

GC content: 28.16

Gene sequence:

>522_bases
ATGAGAAAAAGTAGTATACCAAATATATTTACTTTTATAAACCTATCTTTTGGTATATTATCATTATTAGCAACATTTAA
ATCAGAGTATTTATTAGCAGCAATATTTATACTTCTTGCTGGATTAGTTGATAGATATGACGGAAGAGTTGCTCGTTATT
TAAATGTTTCTAGTGATCTTGGTAAGGAACTAGATTCTTTAGCGGATTTAGTATCATTTGGTGTGGCACCATCAGTATTA
ACTTTTGTATTTTATAATTTTGAATCTTTAGGTCCTATGGGAATTATAGGTTATGCATTGTTACTTTGCTTCCCTATTTG
TGGAGCTTTCAGATTAGCTAGATACAATGCAACTGAATTTGACGGTGTATTTAGAGGAGTACCTATAACTATTGCTGGAG
CTGTTGTTGCTTTATTTATTTTATTATCAATAAAGTTTACTTTAAATATTTTATTCCCAGTAGTAATTTTAGTTGTATTC
TCTTACTTAATGGTTAGTAATTTACAATTAAAGAAATTTTAA

Upstream 100 bases:

>100_bases
ACAATTAGTCCAAAGTTATTTTGTTCTAAGATATATTTAATTTTGGGATTTACATTAATATAATTTTATTATTGTTAATA
TTTTTATTAGGAGTGATTAT

Downstream 100 bases:

>100_bases
CAAAAAATCCTATTAAAGAATTTTCTTTAATAGGATTTTTTATTATTTATTCTTCTTCCTCTCTATTAGAGTTTTCAAAA
AGTAAGTCCTGCTCTACTTC

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDLGKELDSLADLVSFGVAPSVL
TFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEFDGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVF
SYLMVSNLQLKKF

Sequences:

>Translated_173_residues
MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDLGKELDSLADLVSFGVAPSVL
TFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEFDGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVF
SYLMVSNLQLKKF
>Mature_173_residues
MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDLGKELDSLADLVSFGVAPSVL
TFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEFDGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVF
SYLMVSNLQLKKF

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=125, Percent_Identity=40.8, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 19059; Mature: 19059

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH
GKELDSLADLVSFGVAPSVLTFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVFSYLMVSNLQLKKF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHH
GKELDSLADLVSFGVAPSVLTFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DGVFRGVPITIAGAVVALFILLSIKFTLNILFPVVILVVFSYLMVSNLQLKKF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002567; 9384377 [H]