| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is dagK [H]
Identifier: 18310310
GI number: 18310310
Start: 1569338
End: 1570219
Strand: Reverse
Name: dagK [H]
Synonym: CPE1328
Alternate gene names: 18310310
Gene position: 1570219-1569338 (Counterclockwise)
Preceding gene: 18310312
Following gene: 18310309
Centisome position: 51.8
GC content: 30.73
Gene sequence:
>882_bases TTGAAGAAAGTAAGATTTATATATAACCCATATTCGGGAGAGAATGCTATTTTAAAGGAACTTGATAAAATAATCACTAT GCATCAAGATAAGGGATATACTATAGTTCCCTATAGAATTCAAAGGGGAGTAGATGTAATAAATGCTCTAGATATAGTAG ATTCTACTTATGAATACATACTTATTGCAGGTGGAGATGGAACTATAGACACTGTTGTAAATGCTATGAAAAAAAGAGGA ATAGAAATTCCAATAGGAATTATTCCAGTGGGAACAGCAAATGACTTTGCAAAACATTTAGGTATGCCTCAAGATGCAGG TGCATGTGTTGAGCAAATATTAGATTCTTATGCAGTTGGAGTAGACCTAGGTAAGGTAAATGATAATTACTTTGTAAATG TATTATCTACAGGATTATTTACTGATGTATCTCAAAAAACAGATACAAATTTAAAAAATACAATAGGTAAATTAGCATAT TATTTAAAAGGTTTAGAAGAATTGCCTAACTTTAGAAAACTAGATGTTAAAATAACTGCTAATGGCAAGGTGTTTAATGA GCCTATATATTTAATGCTGGTGTTTAATGGTCAAACAGCAGGAAACTTTAAATTAGCAACTAAGGCTAAGGTTCAGGATG GACTTTTAGATATAGTTATATTTAAGGCTTGTCATATTCCAGAATTAATACCTATGTTTATAAAGGTATTAAAGGGAGAA CACTTAGAAGATTCTAGAATTGAGTATATAAGAACAGATGAGCTTCTTATAGAGTCTGATGAGGAAATAGTTACAGATAT AGATGGAGAGAGAGGGCCAGATTTCCCATTAAGAGTTCAATGTATTAAAGATGGAATACAAGTTTTAGGAATAAATAAGT AA
Upstream 100 bases:
>100_bases TTGTAGGGTTTGTATAATATATTAAAAATGATACCATTAATTGAAAGAAATATCAATTTAATTTATTTATAGTAAGTAAT TAAAAGTGGAGGGTAAGACA
Downstream 100 bases:
>100_bases TATAAATAATAACTTATAGTAATGAGATTTAATATGTAAACAAGATAGGTGAGAAATAAATTAGGAGGAATTATGAATCA AACATTTATTTATTACACAG
Product: putative lipid kinase
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKKVRFIYNPYSGENAILKELDKIITMHQDKGYTIVPYRIQRGVDVINALDIVDSTYEYILIAGGDGTIDTVVNAMKKRG IEIPIGIIPVGTANDFAKHLGMPQDAGACVEQILDSYAVGVDLGKVNDNYFVNVLSTGLFTDVSQKTDTNLKNTIGKLAY YLKGLEELPNFRKLDVKITANGKVFNEPIYLMLVFNGQTAGNFKLATKAKVQDGLLDIVIFKACHIPELIPMFIKVLKGE HLEDSRIEYIRTDELLIESDEEIVTDIDGERGPDFPLRVQCIKDGIQVLGINK
Sequences:
>Translated_293_residues MKKVRFIYNPYSGENAILKELDKIITMHQDKGYTIVPYRIQRGVDVINALDIVDSTYEYILIAGGDGTIDTVVNAMKKRG IEIPIGIIPVGTANDFAKHLGMPQDAGACVEQILDSYAVGVDLGKVNDNYFVNVLSTGLFTDVSQKTDTNLKNTIGKLAY YLKGLEELPNFRKLDVKITANGKVFNEPIYLMLVFNGQTAGNFKLATKAKVQDGLLDIVIFKACHIPELIPMFIKVLKGE HLEDSRIEYIRTDELLIESDEEIVTDIDGERGPDFPLRVQCIKDGIQVLGINK >Mature_293_residues MKKVRFIYNPYSGENAILKELDKIITMHQDKGYTIVPYRIQRGVDVINALDIVDSTYEYILIAGGDGTIDTVVNAMKKRG IEIPIGIIPVGTANDFAKHLGMPQDAGACVEQILDSYAVGVDLGKVNDNYFVNVLSTGLFTDVSQKTDTNLKNTIGKLAY YLKGLEELPNFRKLDVKITANGKVFNEPIYLMLVFNGQTAGNFKLATKAKVQDGLLDIVIFKACHIPELIPMFIKVLKGE HLEDSRIEYIRTDELLIESDEEIVTDIDGERGPDFPLRVQCIKDGIQVLGINK
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=292, Percent_Identity=27.3972602739726, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 32615; Mature: 32615
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVRFIYNPYSGENAILKELDKIITMHQDKGYTIVPYRIQRGVDVINALDIVDSTYEYI CCCEEEEECCCCCCHHHHHHHHHHHEEECCCCCEEEEHHHHCCHHHHHHHHHHCCCEEEE LIAGGDGTIDTVVNAMKKRGIEIPIGIIPVGTANDFAKHLGMPQDAGACVEQILDSYAVG EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC VDLGKVNDNYFVNVLSTGLFTDVSQKTDTNLKNTIGKLAYYLKGLEELPNFRKLDVKITA EEEECCCCCEEEEEEHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE NGKVFNEPIYLMLVFNGQTAGNFKLATKAKVQDGLLDIVIFKACHIPELIPMFIKVLKGE CCEEECCCEEEEEEECCCCCCCEEEEEHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCC HLEDSRIEYIRTDELLIESDEEIVTDIDGERGPDFPLRVQCIKDGIQVLGINK CCCCCCEEEEECCCEEEECCCHHHHCCCCCCCCCCCEEHHEECCCCEEEECCC >Mature Secondary Structure MKKVRFIYNPYSGENAILKELDKIITMHQDKGYTIVPYRIQRGVDVINALDIVDSTYEYI CCCEEEEECCCCCCHHHHHHHHHHHEEECCCCCEEEEHHHHCCHHHHHHHHHHCCCEEEE LIAGGDGTIDTVVNAMKKRGIEIPIGIIPVGTANDFAKHLGMPQDAGACVEQILDSYAVG EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC VDLGKVNDNYFVNVLSTGLFTDVSQKTDTNLKNTIGKLAYYLKGLEELPNFRKLDVKITA EEEECCCCCEEEEEEHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE NGKVFNEPIYLMLVFNGQTAGNFKLATKAKVQDGLLDIVIFKACHIPELIPMFIKVLKGE CCEEECCCEEEEEEECCCCCCCEEEEEHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCC HLEDSRIEYIRTDELLIESDEEIVTDIDGERGPDFPLRVQCIKDGIQVLGINK CCCCCCEEEEECCCEEEECCCHHHHCCCCCCCCCCCEEHHEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA