Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310305

Identifier: 18310305

GI number: 18310305

Start: 1564655

End: 1565926

Strand: Reverse

Name: 18310305

Synonym: CPE1323

Alternate gene names: NA

Gene position: 1565926-1564655 (Counterclockwise)

Preceding gene: 18310309

Following gene: 18310304

Centisome position: 51.66

GC content: 27.67

Gene sequence:

>1272_bases
ATGAACAAATTAACAATGTTTTTATACAGTAACATAATCAATAAGAAAATATATGATGAATTCAATGAAGTCCTAGGAGT
TTTAAAGGATGTTTATGTAACTACAGAGGATGGTTATCCAAGAATTATAGGATATAAAGTAAAGAGAGATGGAGTCATAT
TTGATTATGAGTTTAAAAATATAGATTTTTATCAAAAAGATAATGGGAAATTTAAAATACAAATAAGGGGGAGTAGAGAG
ATATTACCTAGAAATTATAGCTATCTTTTATCTCAAAATTTATTAGATAGAAAAATAGTAGATATAAATGGAAAAAAAGT
AGTTAAGGTTGATGATTTAAGAATAGTAAAAATAGCAGGTGAGTTTAGGGTAATAGCTGTTGAAACTGGAAAGATAGTAA
AGTTTAGACGTAATGGATTAGAGGGATTAGGAAAATTATTAGCTAAAGTTTTTAAAGAAAAGTTTCAAGAAAAAGTTATT
ATGTGGGAAGATGTTGAGTCTTTAGAAATGATTAATGATAACTTAAAGTTAGCTATTCCATATAAAAAGCTTCAAAAATT
ACATCCAGCTGACTTAGCAGATATACTTGAAGAACTTGATGCCATAAACAGAAAAAAAGTTTTCGATAGCTTAGATGAAG
ATTTAGCTGCAGATACCTTAGAAGAAATAGAACCAGAAGTACAAAGTAGTATAATAAAGGGACTTTCCCATTCTAAAACT
GCAGAGCTTTTTGAAAATATTCCAAATGACGAAATAGCAGACATTATAGATGAACTAGATGAGGAAGAAAGAGAAAAAGT
ATTAATTGCCTTAGAAAATGAAGACGCAGAAGAAGTTAAAGAGCTTATGGGATATTCAGATGAATCTGTAGGTAGTATAA
TGAACAAGGATTTTATATCTTTTAATTTAGATCTTACTGTAAAAGAGACTATAGAACTTTTAAGAGAATTAGATGCAGAT
GAAGAAGTTATGTACTATGTTTATATAACTGATGAAGAAGATAGATTAAATGGAGTTGTAACTTTAAGAGATTTAATAAT
GAATGAAGAAAATAAGAGACTTAAGGAAATTATGCACACATCTTCCATAAGTGTTAATATAGATAGTACTATAGAGGATG
CCATAGAAAAATCAACAAAGTATGATTTAATATCTATTCCTGTTGTGGACTATGAAGAAAAATTAGTTGGTATGGTTCTT
ATTCACGATATAGTTGATGAATTAATTCCTAACAACTTAAAAAGAAAATTTAAGAAAAAGTACACAGATTAG

Upstream 100 bases:

>100_bases
TATTTTCTAGATTAGATTAAACTTATAATATACTTCTCCTTTTCTTAAAAATGAAATTTAATTTTAAAATTTTTTTAAAA
TTAAAAAGGAGGAGAGCTGG

Downstream 100 bases:

>100_bases
TTGACAAATTTTAATAAAAGAATATAATAAAGTATATAATTCGTATCAAAATAGTCGGATAAATGTTGTGATAAAGTAAA
GTATTATAAGGATAGGTCAC

Product: CBS domain/MgtE intracellular domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNKLTMFLYSNIINKKIYDEFNEVLGVLKDVYVTTEDGYPRIIGYKVKRDGVIFDYEFKNIDFYQKDNGKFKIQIRGSRE
ILPRNYSYLLSQNLLDRKIVDINGKKVVKVDDLRIVKIAGEFRVIAVETGKIVKFRRNGLEGLGKLLAKVFKEKFQEKVI
MWEDVESLEMINDNLKLAIPYKKLQKLHPADLADILEELDAINRKKVFDSLDEDLAADTLEEIEPEVQSSIIKGLSHSKT
AELFENIPNDEIADIIDELDEEEREKVLIALENEDAEEVKELMGYSDESVGSIMNKDFISFNLDLTVKETIELLRELDAD
EEVMYYVYITDEEDRLNGVVTLRDLIMNEENKRLKEIMHTSSISVNIDSTIEDAIEKSTKYDLISIPVVDYEEKLVGMVL
IHDIVDELIPNNLKRKFKKKYTD

Sequences:

>Translated_423_residues
MNKLTMFLYSNIINKKIYDEFNEVLGVLKDVYVTTEDGYPRIIGYKVKRDGVIFDYEFKNIDFYQKDNGKFKIQIRGSRE
ILPRNYSYLLSQNLLDRKIVDINGKKVVKVDDLRIVKIAGEFRVIAVETGKIVKFRRNGLEGLGKLLAKVFKEKFQEKVI
MWEDVESLEMINDNLKLAIPYKKLQKLHPADLADILEELDAINRKKVFDSLDEDLAADTLEEIEPEVQSSIIKGLSHSKT
AELFENIPNDEIADIIDELDEEEREKVLIALENEDAEEVKELMGYSDESVGSIMNKDFISFNLDLTVKETIELLRELDAD
EEVMYYVYITDEEDRLNGVVTLRDLIMNEENKRLKEIMHTSSISVNIDSTIEDAIEKSTKYDLISIPVVDYEEKLVGMVL
IHDIVDELIPNNLKRKFKKKYTD
>Mature_423_residues
MNKLTMFLYSNIINKKIYDEFNEVLGVLKDVYVTTEDGYPRIIGYKVKRDGVIFDYEFKNIDFYQKDNGKFKIQIRGSRE
ILPRNYSYLLSQNLLDRKIVDINGKKVVKVDDLRIVKIAGEFRVIAVETGKIVKFRRNGLEGLGKLLAKVFKEKFQEKVI
MWEDVESLEMINDNLKLAIPYKKLQKLHPADLADILEELDAINRKKVFDSLDEDLAADTLEEIEPEVQSSIIKGLSHSKT
AELFENIPNDEIADIIDELDEEEREKVLIALENEDAEEVKELMGYSDESVGSIMNKDFISFNLDLTVKETIELLRELDAD
EEVMYYVYITDEEDRLNGVVTLRDLIMNEENKRLKEIMHTSSISVNIDSTIEDAIEKSTKYDLISIPVVDYEEKLVGMVL
IHDIVDELIPNNLKRKFKKKYTD

Specific function: Acts as a magnesium transporter [H]

COG id: COG2239

COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR006668
- InterPro:   IPR006667
- InterPro:   IPR006669 [H]

Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]

EC number: NA

Molecular weight: Translated: 49092; Mature: 49092

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLTMFLYSNIINKKIYDEFNEVLGVLKDVYVTTEDGYPRIIGYKVKRDGVIFDYEFKN
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCEEEEEEECC
IDFYQKDNGKFKIQIRGSREILPRNYSYLLSQNLLDRKIVDINGKKVVKVDDLRIVKIAG
CEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEECCEEEEEEEC
EFRVIAVETGKIVKFRRNGLEGLGKLLAKVFKEKFQEKVIMWEDVESLEMINDNLKLAIP
CEEEEEEECCCEEHHHHCCHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHCCCCEEEEC
YKKLQKLHPADLADILEELDAINRKKVFDSLDEDLAADTLEEIEPEVQSSIIKGLSHSKT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHH
AELFENIPNDEIADIIDELDEEEREKVLIALENEDAEEVKELMGYSDESVGSIMNKDFIS
HHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCEE
FNLDLTVKETIELLRELDADEEVMYYVYITDEEDRLNGVVTLRDLIMNEENKRLKEIMHT
EEEEEEHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
SSISVNIDSTIEDAIEKSTKYDLISIPVVDYEEKLVGMVLIHDIVDELIPNNLKRKFKKK
CCEEEEECHHHHHHHHHCCCCEEEEECEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YTD
CCC
>Mature Secondary Structure
MNKLTMFLYSNIINKKIYDEFNEVLGVLKDVYVTTEDGYPRIIGYKVKRDGVIFDYEFKN
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCEEEEEEECC
IDFYQKDNGKFKIQIRGSREILPRNYSYLLSQNLLDRKIVDINGKKVVKVDDLRIVKIAG
CEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEECCEEEEEEEC
EFRVIAVETGKIVKFRRNGLEGLGKLLAKVFKEKFQEKVIMWEDVESLEMINDNLKLAIP
CEEEEEEECCCEEHHHHCCHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHCCCCEEEEC
YKKLQKLHPADLADILEELDAINRKKVFDSLDEDLAADTLEEIEPEVQSSIIKGLSHSKT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHH
AELFENIPNDEIADIIDELDEEEREKVLIALENEDAEEVKELMGYSDESVGSIMNKDFIS
HHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCEE
FNLDLTVKETIELLRELDADEEVMYYVYITDEEDRLNGVVTLRDLIMNEENKRLKEIMHT
EEEEEEHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
SSISVNIDSTIEDAIEKSTKYDLISIPVVDYEEKLVGMVLIHDIVDELIPNNLKRKFKKK
CCEEEEECHHHHHHHHHCCCCEEEEECEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YTD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA