Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310247

Identifier: 18310247

GI number: 18310247

Start: 1480226

End: 1481989

Strand: Direct

Name: 18310247

Synonym: CPE1265

Alternate gene names: NA

Gene position: 1480226-1481989 (Clockwise)

Preceding gene: 18310245

Following gene: 18310265

Centisome position: 48.83

GC content: 31.29

Gene sequence:

>1764_bases
ATGAAAAAAGATACTATTCTTGGTGCTTCTATTGGCTCTACTGACTTTCATTATCTTCAAAAGGATTATGATGAAATAAA
GAAATTAAACTTAAATACTTGGAATGAGGTAGCTTGGATAGGAGATGAACTTAATTCTAAAATTGTTATGTGGACAAACT
CCTCTCCTGTTAATAATGTTACCCTTTCTTCAAGTGACTTTATAAATGAAAATGGGGATTTAATCTCTTCAAATAATATT
AAGATTTCTTGGCTTAAAGAAACCTTAGCTAATATAGGACGTAGTAATCCTTCTGCTCCTCTTGAACCTTTCCCAGATAT
TATTCATAATTCTGGTTCACTAAATATAGAAAAAAATAAAATAGCCTCTGCATGGATTAATATAAAAATTCCTAGGAATG
CAAAACCTGGAATTTATAATGGTTCTATTGAGGTCACTGCTGATGAATTAGAAAAAGCCTATACTTTTGATTATTCCTTT
GAAGTTTTAAACTTAGTACAACCTCTTCCAAGGGAAACAAATACTCAAATTGAGTTTTGGCAACATCCTTACACCATAGC
AAGGTATTATAAAATATCCAAAGAAGATTTATTTACAGAAAAGCATTTTAAATATTTAAAAGATAATCTTAAAGAGTATA
GAAATATAGGAGGACGTGGTGTTATAGCTACTATAGTTCATGAAGCTTGGAATCATCAATCTTATGATAGTGACCCTTCA
ATGATTAAGTGGAGAAAAAACTCCTATGGCACCTTTGAATTTGACTACTCTCACTTTGATAAGTGGATTCAACTTAATAT
AGACTTAGGAATTCTAGATCCTGAAAAGGGCTTTGGCCAAATAAAGTGTTACAGTATTGTCCCTTGGAATAATAGAATTC
AGTACTTTAATGAGGCTACTAATAAAGAAGAAGCCATAAATCCAAACCCTGGTGGTGATCTTTGGATAAACATTTGGACA
CAATTTTTAACTTCATTTATGTCTCATCTTGAAGAAAAAGGATGGTTTAACATAACTTATATTTCAATGGATGAAAGAAG
TATGGATGATTTAAAAGCTTGTGTTGATTTAATTGAAAGCATAACAAATAACTCTTATGAGCATTTTAAAATTTCTTCTG
CCATGGATTATGAAAGTGGAAATGACTACTCCTTCTTAGATAGAATAGATGATATATCAATTGGATTATCCCATATAAAT
CATAATTCTAATGATATGAAAAACATGGCTACTCATAGACAAGAGCTTGGATTATTAACTACAATATACACCTGTACTGG
AGATTATCCAAGTAGTTTCACCATAAGTGATCCTATAGAAGGTGCTTTTACTATGTGGTACTCCCTATATCAAAACACCA
ATGGCTTTTTACGTTGGTCATGGGATGGTTGGGTTGAAAACCCTTTAGAAAATGTTTCTTATAAATATTGGGAACCTGGA
GACCCTTTTCTTATATACCCAGCAGAAAAGGATAGCATAGGTAAAACCTTTTATTCTACTCCTAGATTAGAAAAATTAAA
GGAAGGTATAAGAGATATAAACAAAGCTAAATACCTTATGGAAAAGGCTCCAAACTTAAAGAATTCTATAGAAAATTTAA
TCTACTCTCTAAAAAGACCTAATAAAGGAGAAAATGCCTATGGCTCTGCAGTAGCAGCTTCTAAGGAAGATAGAGATTTA
ACTATCTCAGAAGCAAATAGAATTAAAAATGGCATAAATAACTTTGCAAGAGAATTTATTTCATTAACTATGGAAACCTT
GTAG

Upstream 100 bases:

>100_bases
CCTTTTAACAATATACTTTTTTTAAATGTTCTATTTTTAAAACTTCTATCTTATAATGTATTTATTACTAATTTTTAGAA
AAAGAAGGAAGGTTTATTTT

Downstream 100 bases:

>100_bases
TTAATCTACTTAGAAATTTTCACCCTTTAGAAATCAATAAAAATAGACGTGTATCAAAGTAAGTTTTATTATTATACTTT
GATACACCCCCCTTTTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MKKDTILGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDLISSNNI
KISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNKIASAWINIKIPRNAKPGIYNGSIEVTADELEKAYTFDYSF
EVLNLVQPLPRETNTQIEFWQHPYTIARYYKISKEDLFTEKHFKYLKDNLKEYRNIGGRGVIATIVHEAWNHQSYDSDPS
MIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEATNKEEAINPNPGGDLWINIWT
QFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIESITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHIN
HNSNDMKNMATHRQELGLLTTIYTCTGDYPSSFTISDPIEGAFTMWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPG
DPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAASKEDRDL
TISEANRIKNGINNFAREFISLTMETL

Sequences:

>Translated_587_residues
MKKDTILGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDLISSNNI
KISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNKIASAWINIKIPRNAKPGIYNGSIEVTADELEKAYTFDYSF
EVLNLVQPLPRETNTQIEFWQHPYTIARYYKISKEDLFTEKHFKYLKDNLKEYRNIGGRGVIATIVHEAWNHQSYDSDPS
MIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEATNKEEAINPNPGGDLWINIWT
QFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIESITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHIN
HNSNDMKNMATHRQELGLLTTIYTCTGDYPSSFTISDPIEGAFTMWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPG
DPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAASKEDRDL
TISEANRIKNGINNFAREFISLTMETL
>Mature_587_residues
MKKDTILGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDLISSNNI
KISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNKIASAWINIKIPRNAKPGIYNGSIEVTADELEKAYTFDYSF
EVLNLVQPLPRETNTQIEFWQHPYTIARYYKISKEDLFTEKHFKYLKDNLKEYRNIGGRGVIATIVHEAWNHQSYDSDPS
MIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEATNKEEAINPNPGGDLWINIWT
QFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIESITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHIN
HNSNDMKNMATHRQELGLLTTIYTCTGDYPSSFTISDPIEGAFTMWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPG
DPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAASKEDRDL
TISEANRIKNGINNFAREFISLTMETL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67763; Mature: 67763

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDTILGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNV
CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCEEEEEECCCCCCEE
TLSSSDFINENGDLISSNNIKISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNK
EECCCCCCCCCCCEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEECCE
IASAWINIKIPRNAKPGIYNGSIEVTADELEKAYTFDYSFEVLNLVQPLPRETNTQIEFW
EEEEEEEEEECCCCCCCEECCEEEEEHHHHHHHEECCCHHHHHHHHCCCCCCCCCCEEEE
QHPYTIARYYKISKEDLFTEKHFKYLKDNLKEYRNIGGRGVIATIVHEAWNHQSYDSDPS
CCCEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
MIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEAT
EEEEECCCCCEEEECHHHCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHCC
NKEEAINPNPGGDLWINIWTQFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIES
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH
ITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHINHNSNDMKNMATHRQELGLLT
HHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEE
TIYTCTGDYPSSFTISDPIEGAFTMWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPG
EEEEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCEEEECCC
DPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRP
CCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
NKGENAYGSAVAASKEDRDLTISEANRIKNGINNFAREFISLTMETL
CCCCCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKDTILGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNV
CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCEEEEEECCCCCCEE
TLSSSDFINENGDLISSNNIKISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNK
EECCCCCCCCCCCEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEECCE
IASAWINIKIPRNAKPGIYNGSIEVTADELEKAYTFDYSFEVLNLVQPLPRETNTQIEFW
EEEEEEEEEECCCCCCCEECCEEEEEHHHHHHHEECCCHHHHHHHHCCCCCCCCCCEEEE
QHPYTIARYYKISKEDLFTEKHFKYLKDNLKEYRNIGGRGVIATIVHEAWNHQSYDSDPS
CCCEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
MIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEAT
EEEEECCCCCEEEECHHHCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHCC
NKEEAINPNPGGDLWINIWTQFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIES
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH
ITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHINHNSNDMKNMATHRQELGLLT
HHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEE
TIYTCTGDYPSSFTISDPIEGAFTMWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPG
EEEEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCEEEECCC
DPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRP
CCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
NKGENAYGSAVAASKEDRDLTISEANRIKNGINNFAREFISLTMETL
CCCCCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA