| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is entA
Identifier: 18310240
GI number: 18310240
Start: 1467436
End: 1470303
Strand: Direct
Name: entA
Synonym: CPE1258
Alternate gene names: NA
Gene position: 1467436-1470303 (Clockwise)
Preceding gene: 18310228
Following gene: 18310244
Centisome position: 48.41
GC content: 32.46
Gene sequence:
>2868_bases ATGGCTGTAGCAATAGTTCAGCAGCAACAACAACCAAATGATAATATTAATATTGACTTGTCTAATTCTAATGTTGCTGT GGTAAAAAGTAAAAAAGAAACTAATCCCCCTATAAAAGATGAAAAACAATCAAAGGATAAAGATAATTTAAAATCTGATA AAAAAATCGAGCCTAAAGTTGAAGAAAAAAAGCAAGATAAAAGTAACTCAAAGGAAGAAAATAAAGCTCAGGTAAAAACT GAGCCTAAAGTTAAAGAGGATAAAGACATAAAGAAAAGTTCTGATGAAATTAAAGAAGAGGTAAAAAATCAAAAACCTGT TATAAAAGAAGTAAAATTACCTGTTGAAAAAGATTCAAAGAATTCTTCTGAAAATTTATCTAATAACTCAAGTGACTTTG CTTCAGATGTTAATAGAAGATTATATGAATATGAAAATGTTAGAAGTAATCAATCTAATGCAATGAATGAAGCTATTCGT CTTCATAATGGAGACCCTAGCAATACTTGTGTTTTCTTCCAAGGTGCTTGTTTAAGAGCAATAGGAGTACCTGTTCCAAG TCATATTGGATACACTTCTAACCTTTGGAATTGGCTAGAAAATAATAACTGGGAAATGCATAGAGATTTTTCAAACATCC AAAAGGGAGATATTATCTTTGCAGGTGAATATCACACAATGTGTTTTATGGGATGGAAGGATAAAGCAAATGGTATTGCC TATGTAATGGGAAATGAAGCCTATACTTATGGAGATGCCTATGCTCATCGTAATTTAAATGGACAAGCTCCTACTAAAGA AAATGGATGGAATAGACAGTATAGAGCTACAAGATACTATAAATATAAAGGAAATTCTTCAAAAAGTAATTCTGACATTG TAAAAACAAACATTGTAACATCAAAACCTGTTAGCTCAAAGGATCATAAATATACAGTTGAAGCCTTAAAGGGTACTGTA ACAGCTAAGCAAGATGTTTATATTAATGAAAAACCCTTCCCTACTACTGAAGGAATTAAGCCTGTAGGACTAGCTAATGG CGGAGATAAACTAACTGTAACTGGTAGAGCCTCAAATGGATGGTATGAAGTTCTTTATAATGGCCAAAAAGCTTACATAA GTCATAGATATACTGACTTCTTAGAAGAAAAAGAATCTCCATCTAAGTCATCTGATTCTGTTACTCCTCTTGGCGTAGTT AAAACTAATACTTCAGATAAAAAATCTGATTCTAAAGAAGATAATAAAAAAGTAGAAAGTTCTCTTAAAGATAAGGATGA AAAGGTGAACAAGGGAGATAAATCTACTGAGGGTAAAAATGTAACTGAGTCTAAGGATAAAGCTACTAATAAAGTGGAAT CAAATAAAACTGAACAAGCTAAGCCTTTAGAATCTAGTAAGCCAGTTGAAGAAACTAAAAAAGAGGAATCAAGTAAGCCT TCTGAAACAGTTACAAAAACTGCCTTTATAAAGGCTAATGGTGGTTTATGGCTACATTCTAGCAAGGATACTTCATACTC TTCTAGAGTAAATCTAATGAGTAATGGAGCTAAGGTTAATGTTTTAGAGGAAGATAACTCTTGGTTTAAGGTTAACTATA ATGGAAATACAGGTTGGTGTTCAAGTAAATATGTAACTAACCCAGTTTCTTCTGAAAGCTCAACTAATAAAAAAGTAGAA GAAAATAAAGCTACAGAACCTAATAAAACTATGGAAGAAAATAAACCTAAGAAAGAATCTGAAACAAGCAAACCTGCTTT GACAATTGTTAAAACTGCTTCTATAAAAGCTAATGGTGGACTATGGTTACACTCTTCTAAGGATTCATATATCTCTTCTA GATTAGAAATTATGGATAAGGGTGAAAAGGTTACAATCTTAGAGGAAAATGGAGATTGGTTTAAGGTTAACTATAATGGT AAAACTGGCTTCTGTGCAAGTAAATACTTAAGTGAACCTACTACTTATGAAAAACAATCTGAATCTAATAAAGTAGAGGA AGTTAAAAATACCTCTCCTAGTAAGGCTGTAGAAGAAAGTAAACCTACTACACCTATTAAAACTGTGGAAGAAAATAAAC CTAAAAAGGAAGCTGAAACAAGTAAACCTACTTTAACAAATATTAAAAGAGCCTCTGTAAAGGCAAATGGTGGTTTATGG CTACACTCTACTAAGGATTCCTATGCATCTTCTAGAATTACCATAATGAGTAATGGAGAAAAGGTTGATATTTTAGATGA AAGTGGTTCTTGGTACAAGGTTAACTATAATGGAACTATGGGTTGGTGCTCAAGCCAATTTTTAAGTAACCCAACTGTTA TCTCTCAAAGCTCACCAAGTAAGCATGTAGAAGAAAATAAACCAGTTTATGAAAACAAAACAGTTGAAGTAAGTAAGCCA GTTACTAGTACAGTAAAAACAGCTTACATAAAAGCAAATGGAGGTTTATGGTTACACTCCTCTAAAGATTCCTATGCTTC TTCTAGAATAAGCATAATGAACAAAGGATCAAAGGTAAGAGTTTTAGAAGAAAGTGGTTCTTGGTTTAAAGTTGACCACA ATGGAAATATAGGTTGGTGTTCAAGTGAATTCCTAACTAATCCAGTAACATCACAAAGTAATAATGTGGAAGAAAGTAAA ACAGTTCATCTAGTTCAATCAAGCACTAGTGAAGCTTCATTAAGATCAGCCCATGTAAAAGCTAATGGAGGATTGTGGCT ACACTCATCTAAAGACTCCTCTACTTCATCTAGATTAACTGTAATGGGTAATGGGCATAAGGTTGAAATCTTAGAAGAAA GTGGTTCTTGGTACAAGGTTAGATATAATGGAAACATAGGTTGGTGTGCTAAAGAATTTATAGCTTAA
Upstream 100 bases:
>100_bases ATTCCATTATTTATTAACATTTCTAATTATGGTATAATTACATGGAAAATTTAAGTATTATATACACTATTTTAAACTTA AGAAAATAGGAGATGATTTT
Downstream 100 bases:
>100_bases AAAAATTTGAACTTATAAAATTAATCATAGGGTAATTTAGATATTTTCTTACTTCTAATACCCTAAATAAAATCTGTAAA ATATGCTTTTTAAAAAGGCA
Product: putative enterotoxin
Products: NA
Alternate protein names: Enterotoxin; NlpC/P60 Family Protein; Beta-N-Acetylglucosaminidase; Peptidase S8 And; Peptidase; Cell Wall-Associated Hydrolase; SH3 Domain-Containing Protein; Surface Protein
Number of amino acids: Translated: 955; Mature: 954
Protein sequence:
>955_residues MAVAIVQQQQQPNDNINIDLSNSNVAVVKSKKETNPPIKDEKQSKDKDNLKSDKKIEPKVEEKKQDKSNSKEENKAQVKT EPKVKEDKDIKKSSDEIKEEVKNQKPVIKEVKLPVEKDSKNSSENLSNNSSDFASDVNRRLYEYENVRSNQSNAMNEAIR LHNGDPSNTCVFFQGACLRAIGVPVPSHIGYTSNLWNWLENNNWEMHRDFSNIQKGDIIFAGEYHTMCFMGWKDKANGIA YVMGNEAYTYGDAYAHRNLNGQAPTKENGWNRQYRATRYYKYKGNSSKSNSDIVKTNIVTSKPVSSKDHKYTVEALKGTV TAKQDVYINEKPFPTTEGIKPVGLANGGDKLTVTGRASNGWYEVLYNGQKAYISHRYTDFLEEKESPSKSSDSVTPLGVV KTNTSDKKSDSKEDNKKVESSLKDKDEKVNKGDKSTEGKNVTESKDKATNKVESNKTEQAKPLESSKPVEETKKEESSKP SETVTKTAFIKANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVNYNGNTGWCSSKYVTNPVSSESSTNKKVE ENKATEPNKTMEENKPKKESETSKPALTIVKTASIKANGGLWLHSSKDSYISSRLEIMDKGEKVTILEENGDWFKVNYNG KTGFCASKYLSEPTTYEKQSESNKVEEVKNTSPSKAVEESKPTTPIKTVEENKPKKEAETSKPTLTNIKRASVKANGGLW LHSTKDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFLSNPTVISQSSPSKHVEENKPVYENKTVEVSKP VTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVDHNGNIGWCSSEFLTNPVTSQSNNVEESK TVHLVQSSTSEASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFIA
Sequences:
>Translated_955_residues MAVAIVQQQQQPNDNINIDLSNSNVAVVKSKKETNPPIKDEKQSKDKDNLKSDKKIEPKVEEKKQDKSNSKEENKAQVKT EPKVKEDKDIKKSSDEIKEEVKNQKPVIKEVKLPVEKDSKNSSENLSNNSSDFASDVNRRLYEYENVRSNQSNAMNEAIR LHNGDPSNTCVFFQGACLRAIGVPVPSHIGYTSNLWNWLENNNWEMHRDFSNIQKGDIIFAGEYHTMCFMGWKDKANGIA YVMGNEAYTYGDAYAHRNLNGQAPTKENGWNRQYRATRYYKYKGNSSKSNSDIVKTNIVTSKPVSSKDHKYTVEALKGTV TAKQDVYINEKPFPTTEGIKPVGLANGGDKLTVTGRASNGWYEVLYNGQKAYISHRYTDFLEEKESPSKSSDSVTPLGVV KTNTSDKKSDSKEDNKKVESSLKDKDEKVNKGDKSTEGKNVTESKDKATNKVESNKTEQAKPLESSKPVEETKKEESSKP SETVTKTAFIKANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVNYNGNTGWCSSKYVTNPVSSESSTNKKVE ENKATEPNKTMEENKPKKESETSKPALTIVKTASIKANGGLWLHSSKDSYISSRLEIMDKGEKVTILEENGDWFKVNYNG KTGFCASKYLSEPTTYEKQSESNKVEEVKNTSPSKAVEESKPTTPIKTVEENKPKKEAETSKPTLTNIKRASVKANGGLW LHSTKDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFLSNPTVISQSSPSKHVEENKPVYENKTVEVSKP VTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVDHNGNIGWCSSEFLTNPVTSQSNNVEESK TVHLVQSSTSEASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFIA >Mature_954_residues AVAIVQQQQQPNDNINIDLSNSNVAVVKSKKETNPPIKDEKQSKDKDNLKSDKKIEPKVEEKKQDKSNSKEENKAQVKTE PKVKEDKDIKKSSDEIKEEVKNQKPVIKEVKLPVEKDSKNSSENLSNNSSDFASDVNRRLYEYENVRSNQSNAMNEAIRL HNGDPSNTCVFFQGACLRAIGVPVPSHIGYTSNLWNWLENNNWEMHRDFSNIQKGDIIFAGEYHTMCFMGWKDKANGIAY VMGNEAYTYGDAYAHRNLNGQAPTKENGWNRQYRATRYYKYKGNSSKSNSDIVKTNIVTSKPVSSKDHKYTVEALKGTVT AKQDVYINEKPFPTTEGIKPVGLANGGDKLTVTGRASNGWYEVLYNGQKAYISHRYTDFLEEKESPSKSSDSVTPLGVVK TNTSDKKSDSKEDNKKVESSLKDKDEKVNKGDKSTEGKNVTESKDKATNKVESNKTEQAKPLESSKPVEETKKEESSKPS ETVTKTAFIKANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVNYNGNTGWCSSKYVTNPVSSESSTNKKVEE NKATEPNKTMEENKPKKESETSKPALTIVKTASIKANGGLWLHSSKDSYISSRLEIMDKGEKVTILEENGDWFKVNYNGK TGFCASKYLSEPTTYEKQSESNKVEEVKNTSPSKAVEESKPTTPIKTVEENKPKKEAETSKPTLTNIKRASVKANGGLWL HSTKDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFLSNPTVISQSSPSKHVEENKPVYENKTVEVSKPV TSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVRVLEESGSWFKVDHNGNIGWCSSEFLTNPVTSQSNNVEESKT VHLVQSSTSEASLRSAHVKANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106448; Mature: 106317
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS50002 SH3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAIVQQQQQPNDNINIDLSNSNVAVVKSKKETNPPIKDEKQSKDKDNLKSDKKIEPKV CEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCHHCCCHHHCCCCCCCCCCH EEKKQDKSNSKEENKAQVKTEPKVKEDKDIKKSSDEIKEEVKNQKPVIKEVKLPVEKDSK HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC NSSENLSNNSSDFASDVNRRLYEYENVRSNQSNAMNEAIRLHNGDPSNTCVFFQGACLRA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCEEEEECCCHHHH IGVPVPSHIGYTSNLWNWLENNNWEMHRDFSNIQKGDIIFAGEYHTMCFMGWKDKANGIA HCCCCCCCCCCHHHHHHHHHCCCCEEECCHHCCCCCCEEEEECCCEEEEECCCCCCCCEE YVMGNEAYTYGDAYAHRNLNGQAPTKENGWNRQYRATRYYKYKGNSSKSNSDIVKTNIVT EEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEE SKPVSSKDHKYTVEALKGTVTAKQDVYINEKPFPTTEGIKPVGLANGGDKLTVTGRASNG CCCCCCCCCEEEEEHHHCEEEECCEEEECCCCCCCCCCCCCEEECCCCCEEEEEEECCCC WYEVLYNGQKAYISHRYTDFLEEKESPSKSSDSVTPLGVVKTNTSDKKSDSKEDNKKVES EEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH SLKDKDEKVNKGDKSTEGKNVTESKDKATNKVESNKTEQAKPLESSKPVEETKKEESSKP HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC SETVTKTAFIKANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVNYNGNTGWC CHHEEEEEEEEECCCEEEECCCCCCCHHEEEEEECCCEEEEEECCCCEEEEEECCCCCEE SSKYVTNPVSSESSTNKKVEENKATEPNKTMEENKPKKESETSKPALTIVKTASIKANGG CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEEECCC LWLHSSKDSYISSRLEIMDKGEKVTILEENGDWFKVNYNGKTGFCASKYLSEPTTYEKQS EEEECCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCCHHH ESNKVEEVKNTSPSKAVEESKPTTPIKTVEENKPKKEAETSKPTLTNIKRASVKANGGLW HCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHCCEEEEEEECCCEE LHSTKDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFLSNPTVISQSSPS EECCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCHHHHHCCCCEEEECCCCC KHVEENKPVYENKTVEVSKPVTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVR HHHHCCCCCCCCCEEEECCCCCCCEEEEEEEECCCEEEECCCCCHHHCEEEEECCCCEEE VLEESGSWFKVDHNGNIGWCSSEFLTNPVTSQSNNVEESKTVHLVQSSTSEASLRSAHVK EEECCCCEEEEECCCCEEEECHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHEEEEE ANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFIA ECCCEEEECCCCCCCCCEEEEEECCEEEEEEECCCCEEEEEECCCCCHHHHHHCC >Mature Secondary Structure AVAIVQQQQQPNDNINIDLSNSNVAVVKSKKETNPPIKDEKQSKDKDNLKSDKKIEPKV EEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCHHCCCHHHCCCCCCCCCCH EEKKQDKSNSKEENKAQVKTEPKVKEDKDIKKSSDEIKEEVKNQKPVIKEVKLPVEKDSK HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC NSSENLSNNSSDFASDVNRRLYEYENVRSNQSNAMNEAIRLHNGDPSNTCVFFQGACLRA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCEEEEECCCHHHH IGVPVPSHIGYTSNLWNWLENNNWEMHRDFSNIQKGDIIFAGEYHTMCFMGWKDKANGIA HCCCCCCCCCCHHHHHHHHHCCCCEEECCHHCCCCCCEEEEECCCEEEEECCCCCCCCEE YVMGNEAYTYGDAYAHRNLNGQAPTKENGWNRQYRATRYYKYKGNSSKSNSDIVKTNIVT EEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEE SKPVSSKDHKYTVEALKGTVTAKQDVYINEKPFPTTEGIKPVGLANGGDKLTVTGRASNG CCCCCCCCCEEEEEHHHCEEEECCEEEECCCCCCCCCCCCCEEECCCCCEEEEEEECCCC WYEVLYNGQKAYISHRYTDFLEEKESPSKSSDSVTPLGVVKTNTSDKKSDSKEDNKKVES EEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH SLKDKDEKVNKGDKSTEGKNVTESKDKATNKVESNKTEQAKPLESSKPVEETKKEESSKP HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC SETVTKTAFIKANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVNYNGNTGWC CHHEEEEEEEEECCCEEEECCCCCCCHHEEEEEECCCEEEEEECCCCEEEEEECCCCCEE SSKYVTNPVSSESSTNKKVEENKATEPNKTMEENKPKKESETSKPALTIVKTASIKANGG CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEEECCC LWLHSSKDSYISSRLEIMDKGEKVTILEENGDWFKVNYNGKTGFCASKYLSEPTTYEKQS EEEECCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCCHHH ESNKVEEVKNTSPSKAVEESKPTTPIKTVEENKPKKEAETSKPTLTNIKRASVKANGGLW HCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHCCEEEEEEECCCEE LHSTKDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFLSNPTVISQSSPS EECCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCHHHHHCCCCEEEECCCCC KHVEENKPVYENKTVEVSKPVTSTVKTAYIKANGGLWLHSSKDSYASSRISIMNKGSKVR HHHHCCCCCCCCCEEEECCCCCCCEEEEEEEECCCEEEECCCCCHHHCEEEEECCCCEEE VLEESGSWFKVDHNGNIGWCSSEFLTNPVTSQSNNVEESKTVHLVQSSTSEASLRSAHVK EEECCCCEEEEECCCCEEEECHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHEEEEE ANGGLWLHSSKDSSTSSRLTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFIA ECCCEEEECCCCCCCCCEEEEEECCEEEEEEECCCCEEEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA