The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18310239

Identifier: 18310239

GI number: 18310239

Start: 1465378

End: 1466829

Strand: Reverse

Name: 18310239

Synonym: CPE1257

Alternate gene names: NA

Gene position: 1466829-1465378 (Counterclockwise)

Preceding gene: 18310241

Following gene: 18310238

Centisome position: 48.39

GC content: 33.26

Gene sequence:

>1452_bases
ATGCTTAAAAACAAAAAACTAATGACTTTATTATTAGGAGGAATAATTGGAACATCTTCTATCTTAGCTGGATGTGGTTC
AGGGGGAAATGCTTCGCCTAGTGGTGGTGAAGGAGAAGAACCAGTAAACTTAGTTTGGTATGTAATAGGTAAACCACAAA
CAGATGGAGAAGTAGTAGAGGAAGAAGTAAATAAATATATAAAGGATAAAATAAATGCTACTGTAGACATAAAACATATT
GACTTTGGTGATTATAGTCAAAAAATGAACGTAATAGCTAATTCAGGGGAAGAATACGATTTAGCATTTACATGTTCATG
GGCATTCCCATACTTAGACAATGCGAGAAAGGGAGCTTTCTTAGAGTTAAATGATCTTATAGATAGTCATGGAAAAGACT
TAAAGAATGTTATTGATGAAAGACTTTGGAAGGGTGCAGAGGTTGATGGAAATGTATATGCAGTTCCAAACCAAAAGGAA
ATAGCAGGAGCACCTATGTGGGTATTTGATAAGGAACTTGTTGAAAAATATGATATTCCATATGAAGATATTCATACAGT
TGATGATTTAGAACCATGGCTTGCACTTATAAAAGAGAAGGAACCAGATTTTGTGCCATTCTACACTCAAGGAGATGGAA
TTCCACTAGAAGGATTAGAGGATATAACATCAGGACTAGGTATTTTCTATGATGATGAAAGCTTAACCGTCAAAAATATG
TATGAAACAGAGGAGCTAAAACATCTTTTCACTAAATTAAGAGAATTCTATGAAAAAGGATATATAAATCAAGATGCAGC
AGTTAGTAATATGAAAAATGAAGTTAAGAGATTTGTGTGGAAGGCTGATGGACAACCATATGCTGAAAATGGATGGGGTC
AAGCTTTAGGTAGAGAGGTTGTAACTTCATCAATAGTTTCTCCATATGTTACAAATGCTTCAACTACAGGAGCTATGACT
GCTATATCATCAACTTCTAAGCACCCAGAAAAGGCTATGGAGCTTATAAACTTAGTAAATACTGATTCTACATTAAGAAA
CCTATTAATGTTTGGAATAGAGGGAACTCACTATGAAAAGGTTAGTGATAACCAAATAAAGAGAGATCCAAATGGTCCAT
ACAGTGTTACAAGCTGGGCTTATGGAAACTTATTTGACACTTATGTTTTAGATAGTGACCCAGTAGACAAGTGGGATGCT
TTTGAAGAATTTAACCAAAAGGCTAAAACTTCAACTATATTAGGATTTAAATTTGATACAGAAAAAGTTGTAACTCAAAT
GTCAGCTGTAAGTAATACCTTTAAAGAGTTTATAAAACCTTTATACACAGGTTCTGTAGAGACTGAAGAGACTTTAGAAA
AGTTAAATAAGAAGTTATATGATTCAGGATTAGAAGATATAAAGGTTGAGTTACAAAGACAATTAGATGAATGGAAAAAA
GAAAATAAATAG

Upstream 100 bases:

>100_bases
AAACGTTTTGTTAAATGTTGAAAAAAGAAGAATGGGGAAGTAATTTATACAATATATATATAATGAGGACTTATTAGTTA
CTTTAAGGGGGAAAATAAAA

Downstream 100 bases:

>100_bases
AATTTAGGAATAAAATTAAATAATAATAAATAAAATGTAAAGTAGACTATAGTTTATATAGTCTACTTTGTTTTTTGTGA
AAAATATATTGTTTTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MLKNKKLMTLLLGGIIGTSSILAGCGSGGNASPSGGEGEEPVNLVWYVIGKPQTDGEVVEEEVNKYIKDKINATVDIKHI
DFGDYSQKMNVIANSGEEYDLAFTCSWAFPYLDNARKGAFLELNDLIDSHGKDLKNVIDERLWKGAEVDGNVYAVPNQKE
IAGAPMWVFDKELVEKYDIPYEDIHTVDDLEPWLALIKEKEPDFVPFYTQGDGIPLEGLEDITSGLGIFYDDESLTVKNM
YETEELKHLFTKLREFYEKGYINQDAAVSNMKNEVKRFVWKADGQPYAENGWGQALGREVVTSSIVSPYVTNASTTGAMT
AISSTSKHPEKAMELINLVNTDSTLRNLLMFGIEGTHYEKVSDNQIKRDPNGPYSVTSWAYGNLFDTYVLDSDPVDKWDA
FEEFNQKAKTSTILGFKFDTEKVVTQMSAVSNTFKEFIKPLYTGSVETEETLEKLNKKLYDSGLEDIKVELQRQLDEWKK
ENK

Sequences:

>Translated_483_residues
MLKNKKLMTLLLGGIIGTSSILAGCGSGGNASPSGGEGEEPVNLVWYVIGKPQTDGEVVEEEVNKYIKDKINATVDIKHI
DFGDYSQKMNVIANSGEEYDLAFTCSWAFPYLDNARKGAFLELNDLIDSHGKDLKNVIDERLWKGAEVDGNVYAVPNQKE
IAGAPMWVFDKELVEKYDIPYEDIHTVDDLEPWLALIKEKEPDFVPFYTQGDGIPLEGLEDITSGLGIFYDDESLTVKNM
YETEELKHLFTKLREFYEKGYINQDAAVSNMKNEVKRFVWKADGQPYAENGWGQALGREVVTSSIVSPYVTNASTTGAMT
AISSTSKHPEKAMELINLVNTDSTLRNLLMFGIEGTHYEKVSDNQIKRDPNGPYSVTSWAYGNLFDTYVLDSDPVDKWDA
FEEFNQKAKTSTILGFKFDTEKVVTQMSAVSNTFKEFIKPLYTGSVETEETLEKLNKKLYDSGLEDIKVELQRQLDEWKK
ENK
>Mature_483_residues
MLKNKKLMTLLLGGIIGTSSILAGCGSGGNASPSGGEGEEPVNLVWYVIGKPQTDGEVVEEEVNKYIKDKINATVDIKHI
DFGDYSQKMNVIANSGEEYDLAFTCSWAFPYLDNARKGAFLELNDLIDSHGKDLKNVIDERLWKGAEVDGNVYAVPNQKE
IAGAPMWVFDKELVEKYDIPYEDIHTVDDLEPWLALIKEKEPDFVPFYTQGDGIPLEGLEDITSGLGIFYDDESLTVKNM
YETEELKHLFTKLREFYEKGYINQDAAVSNMKNEVKRFVWKADGQPYAENGWGQALGREVVTSSIVSPYVTNASTTGAMT
AISSTSKHPEKAMELINLVNTDSTLRNLLMFGIEGTHYEKVSDNQIKRDPNGPYSVTSWAYGNLFDTYVLDSDPVDKWDA
FEEFNQKAKTSTILGFKFDTEKVVTQMSAVSNTFKEFIKPLYTGSVETEETLEKLNKKLYDSGLEDIKVELQRQLDEWKK
ENK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54351; Mature: 54351

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNKKLMTLLLGGIIGTSSILAGCGSGGNASPSGGEGEEPVNLVWYVIGKPQTDGEVVE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
EEVNKYIKDKINATVDIKHIDFGDYSQKMNVIANSGEEYDLAFTCSWAFPYLDNARKGAF
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCE
LELNDLIDSHGKDLKNVIDERLWKGAEVDGNVYAVPNQKEIAGAPMWVFDKELVEKYDIP
EEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCCCHHHHHHHHHHHHCCC
YEDIHTVDDLEPWLALIKEKEPDFVPFYTQGDGIPLEGLEDITSGLGIFYDDESLTVKNM
HHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCEEHHH
YETEELKHLFTKLREFYEKGYINQDAAVSNMKNEVKRFVWKADGQPYAENGWGQALGREV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VTSSIVSPYVTNASTTGAMTAISSTSKHPEKAMELINLVNTDSTLRNLLMFGIEGTHYEK
HHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
VSDNQIKRDPNGPYSVTSWAYGNLFDTYVLDSDPVDKWDAFEEFNQKAKTSTILGFKFDT
CCCCCCCCCCCCCCEEECCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCEEEEEECCH
EKVVTQMSAVSNTFKEFIKPLYTGSVETEETLEKLNKKLYDSGLEDIKVELQRQLDEWKK
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ENK
CCC
>Mature Secondary Structure
MLKNKKLMTLLLGGIIGTSSILAGCGSGGNASPSGGEGEEPVNLVWYVIGKPQTDGEVVE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
EEVNKYIKDKINATVDIKHIDFGDYSQKMNVIANSGEEYDLAFTCSWAFPYLDNARKGAF
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCE
LELNDLIDSHGKDLKNVIDERLWKGAEVDGNVYAVPNQKEIAGAPMWVFDKELVEKYDIP
EEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCCCHHHHHHHHHHHHCCC
YEDIHTVDDLEPWLALIKEKEPDFVPFYTQGDGIPLEGLEDITSGLGIFYDDESLTVKNM
HHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCEEHHH
YETEELKHLFTKLREFYEKGYINQDAAVSNMKNEVKRFVWKADGQPYAENGWGQALGREV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VTSSIVSPYVTNASTTGAMTAISSTSKHPEKAMELINLVNTDSTLRNLLMFGIEGTHYEK
HHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
VSDNQIKRDPNGPYSVTSWAYGNLFDTYVLDSDPVDKWDAFEEFNQKAKTSTILGFKFDT
CCCCCCCCCCCCCCEEECCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCEEEEEECCH
EKVVTQMSAVSNTFKEFIKPLYTGSVETEETLEKLNKKLYDSGLEDIKVELQRQLDEWKK
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ENK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA