Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310235

Identifier: 18310235

GI number: 18310235

Start: 1461286

End: 1461624

Strand: Reverse

Name: 18310235

Synonym: CPE1253

Alternate gene names: NA

Gene position: 1461624-1461286 (Counterclockwise)

Preceding gene: 18310236

Following gene: 18310234

Centisome position: 48.22

GC content: 19.76

Gene sequence:

>339_bases
ATGAATTTTAAAAAAAATAAATTAACTCTATTAATCTTTACTCTTATAGTAATTTCAACAGCCATAATTTTTTATATATT
AAAACCTATTAATTTATTTAAATTTATTTTATTTTTAATTTATGTATTTCTAGAAATATTTTTATTTAGACTTTGGATAT
TAAGCACCTATGGTTTTATTTGTATTAATTGTGGGAATACTTTTAATATAGGAATCTTAAAAAGACTTTTATTTTTTAAG
GAAAATAAAGAATGTCCAAAATGTAAAAGTAGAAATATAGTAAAGGAACACCTTTGGAGTTATTGTTTACACAGTTGGAA
TGATTTAGATGAGGATTAA

Upstream 100 bases:

>100_bases
CTATGGGAGCTGGAAAGAAAGCTGCAAAGTCCATTGATTCTTATTTAAGAAAAGAAGAGCAAAATAATATTTAGGAAAAA
TTCTTAAGGAAGAGTTTCAT

Downstream 100 bases:

>100_bases
TATTAAACAAAGAAATATGATTATAATAAACTAAATAAGTGGATACCATATAAAATTAAATTTAATAATTAAATGAATAT
TAATTTTCATTCTAGCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNFKKNKLTLLIFTLIVISTAIIFYILKPINLFKFILFLIYVFLEIFLFRLWILSTYGFICINCGNTFNIGILKRLLFFK
ENKECPKCKSRNIVKEHLWSYCLHSWNDLDED

Sequences:

>Translated_112_residues
MNFKKNKLTLLIFTLIVISTAIIFYILKPINLFKFILFLIYVFLEIFLFRLWILSTYGFICINCGNTFNIGILKRLLFFK
ENKECPKCKSRNIVKEHLWSYCLHSWNDLDED
>Mature_112_residues
MNFKKNKLTLLIFTLIVISTAIIFYILKPINLFKFILFLIYVFLEIFLFRLWILSTYGFICINCGNTFNIGILKRLLFFK
ENKECPKCKSRNIVKEHLWSYCLHSWNDLDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13482; Mature: 13482

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKKNKLTLLIFTLIVISTAIIFYILKPINLFKFILFLIYVFLEIFLFRLWILSTYGFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
CINCGNTFNIGILKRLLFFKENKECPKCKSRNIVKEHLWSYCLHSWNDLDED
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNFKKNKLTLLIFTLIVISTAIIFYILKPINLFKFILFLIYVFLEIFLFRLWILSTYGFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
CINCGNTFNIGILKRLLFFKENKECPKCKSRNIVKEHLWSYCLHSWNDLDED
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA